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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Migut.H02166.1.p |
| Common Name | LOC105965031, MIMGU_mgv1a018173mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
WOX |
| Protein Properties |
Length: 305aa MW: 33930.4 Da PI: 7.768 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.H02166.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63.9 | 2.4e-20 | 33 | 94 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t+eq+++L+el+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++
Migut.H02166.1.p 33 STRWTPTTEQIRILKELYYNngVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 94
58****************98678*************************************97 PP
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| 2 | Wus_type_Homeobox | 115 | 3.6e-37 | 32 | 96 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt+eQi+iL+ely+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
Migut.H02166.1.p 32 SSTRWTPTTEQIRILKELYYnNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 96
789***************9779*****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MAEAHEENGV QGNGNEEGGG KSNNSSYMCR QSSTRWTPTT EQIRILKELY YNNGVRSPTA 60
EQIQRISAKL RQYGKIEGKN VFYWFQNHKA RERQKKRFTS DHQIIPTSTM HHHVSRPGNN 120
TWKTTHQDHL YTKFSSNPPP PAAGGNFPSS STSSTPGFLG SAHVGNYGSV AMEKSFRECS 180
INNQSGGGSV NGGTMGQSFA WIGVDNPYPY PHPYPYPHPF LEKRKLYGQA LDSMEMEMEE 240
QQIETLPLFP MHGDDLVKHD FNGWRRRPQA DDDDSSAVAG PMASLELTLN SYAAAASCTR 300
FSTS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975441 | 1e-42 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |
