PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02116.1.p
Common NameLOC105965066, MIMGU_mgv1a020913mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 388aa    MW: 43782.4 Da    PI: 5.2949
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02116.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.71.1e-34141042101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+ye+++d+++++++sws +g sfvv+++ +fa+++Lp+yFkh+nf+SF+RQLn+YgF+k++ ++         weF++++F +g+++ll
  Migut.H02116.1.p  14 FLVKTYEMVDDPKTSSVVSWSPTGLSFVVWNPPDFARDLLPNYFKHNNFSSFIRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLL 97 
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i r+k
  Migut.H02116.1.p  98 KNIYRRK 104
                       *****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.2E-38798IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467852.09E-3410103IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004155.7E-6210103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-201437IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004478.7E-3114103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-205264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-206577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MDGSNGGNNS AAPFLVKTYE MVDDPKTSSV VSWSPTGLSF VVWNPPDFAR DLLPNYFKHN  60
NFSSFIRQLN TYGFRKIDPD QWEFANEEFI RGQRHLLKNI YRRKPIHSHS GQANASSFTN  120
SEREDYEKEI EKMNQEKNSL QSQIERHKQE NRGYEYQLRS LEQTLQSIDQ RQQQLMATLA  180
QLLQTPRLEH SHNKKRRLLA LHFLHGECKH VGEPKSTTFT VNNTSDSLPL LDLEQVEKLD  240
SSLSFWETFL DGIDQTLSED EFMVASSGDS DLRAPPPPPF SPVVRHMSAS HSRDCNSSSS  300
NYDVDSPAIS SICIDMDSRQ KPTLGIDVNL SPTKTPDAEM PNEREISGGA APSLPAGAND  360
VFWQQFLTEA PGSSPSMAKE VQSERRD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B9e-25310319129Heat shock factor protein 1
5d5v_B9e-25310319129Heat shock factor protein 1
5d5v_D9e-25310319129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02116.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845027.10.0PREDICTED: heat stress transcription factor A-4b-like
TrEMBLA0A022QPW10.0A0A022QPW1_ERYGU; Uncharacterized protein
STRINGMigut.H02116.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84352329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.13e-66heat shock transcription factor A4A