PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01675.1.p | ||||||||
Common Name | MIMGU_mgv1a022022mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 181aa MW: 20121.1 Da PI: 5.3154 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.8 | 2.1e-07 | 7 | 28 | 23 | 45 |
-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwq 45 +W++Ia++++ gRt++++k+ w+ Migut.H01675.1.p 7 RWSKIASRFP-GRTDNEIKNVWN 28 7*********.*********998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.325 | 1 | 35 | IPR017930 | Myb domain |
CDD | cd00167 | 4.17E-5 | 5 | 31 | No hit | No description |
SuperFamily | SSF46689 | 8.16E-9 | 6 | 40 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.5E-5 | 6 | 28 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 9.9E-12 | 6 | 41 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MLSNFRRWSK IASRFPGRTD NEIKNVWNIH LKKRVTKENI APHVNINVGQ LLDQGVQLDS 60 DANYEKPEFL NVKSVSGHSP PTSSYASSSG FSNSNEGNTK ANEALEHNYS NGKIEIPLEY 120 SDVDLWELFD SLDELDNGGR GNRDSDPSNA DIGTDGGNWI RLLENELGLT KKQKNKNFAV 180 * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01675.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841606.1 | 1e-116 | PREDICTED: protein ODORANT1-like | ||||
TrEMBL | A0A022R1D3 | 1e-128 | A0A022R1D3_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 2e-12 | myb domain protein 58 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01675.1.p |