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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.H01491.1.p |
Common Name | MIMGU_mgv1a022013mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
HSF |
Protein Properties |
Length: 205aa MW: 23512.1 Da PI: 10.1113 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H01491.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 103.7 | 1.5e-32 | 24 | 129 | 2 | 101 |
HHHHHHHHHCTG...............GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSE CS
HSF_DNA-bind 2 Flkklyeilede...............elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiw 79
Fl+k+y++le+e e +++sw+++gn fvv+ + +f++ +LpkyFkh+nf+SF+RQLn+YgFkk+ +++ w
Migut.H01491.1.p 24 FLSKTYDLLEEEeicgggrgggaahgvERLRIVSWNSEGNGFVVWSPADFSEAMLPKYFKHNNFSSFIRQLNTYGFKKTASKR---------W 107
9*********888999999999999988899************************************************9988.........* PP
EEEESXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 80 eFkhksFkkgkkellekikrkk 101
eF+h++Fk+g+++ll +i rkk
Migut.H01491.1.p 108 EFQHEKFKRGQRHLLAEIGRKK 129
********************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MATTPPHAPE PAGMTRKIKC PAPFLSKTYD LLEEEEICGG GRGGGAAHGV ERLRIVSWNS 60 EGNGFVVWSP ADFSEAMLPK YFKHNNFSSF IRQLNTYGFK KTASKRWEFQ HEKFKRGQRH 120 LLAEIGRKKC DPSGFPPFLK AKYCSKNKSN NNNNNTKNMV MLMEENNKLR RERKDLEMQI 180 SHFKNLEMKL LECLSQYTTM PLLF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hdk_A | 4e-17 | 20 | 128 | 7 | 110 | Heat shock factor protein 2 |
5hdk_B | 4e-17 | 20 | 128 | 7 | 110 | Heat shock factor protein 2 |
5hdk_C | 4e-17 | 20 | 128 | 7 | 110 | Heat shock factor protein 2 |
5hdk_D | 4e-17 | 20 | 128 | 7 | 110 | Heat shock factor protein 2 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:7948881}. |
Publications
? help Back to Top |
- Hsu SF,Jinn TL
AtHSBP functions in seed development and the motif is required for subcellular localization and interaction with AtHSFs. Plant Signal Behav, 2010. 5(8): p. 1042-4 [PMID:20657173] - Liu HC,Charng YY
Common and distinct functions of Arabidopsis class A1 and A2 heat shock factors in diverse abiotic stress responses and development. Plant Physiol., 2013. 163(1): p. 276-90 [PMID:23832625] - Li S, et al.
HEAT-INDUCED TAS1 TARGET1 Mediates Thermotolerance via HEAT STRESS TRANSCRIPTION FACTOR A1a-Directed Pathways in Arabidopsis. Plant Cell, 2014. 26(4): p. 1764-1780 [PMID:24728648] - Muench M,Hsin CH,Ferber E,Berger S,Mueller MJ
Reactive electrophilic oxylipins trigger a heat stress-like response through HSFA1 transcription factors. J. Exp. Bot., 2016. 67(21): p. 6139-6148 [PMID:27811081]
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