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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01331.1.p | ||||||||
Common Name | LOC105951337, MIMGU_mgv1a001317mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 842aa MW: 92522.6 Da PI: 6.594 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.8e-18 | 19 | 76 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+++Le+++ ++++p+ ++r++L +++ +++ +q+kvWFqNrR +ek+ Migut.H01331.1.p 19 YVRYTPEQVDALERVYSECPKPTSSKRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76 6789****************************************************97 PP | |||||||
2 | bZIP_1 | 19.8 | 1.7e-06 | 70 | 114 | 18 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 rr+R++ ++e +L++ +L+a Nk L +e+ +l+++v l + Migut.H01331.1.p 70 RRCREKQRKEASHLQTVNRKLTAMNKLLMEENGRLQNQVTHLVHK 114 9**************************************988666 PP | |||||||
3 | START | 148.9 | 4.7e-47 | 166 | 373 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 +aee+++e++ ka+ ++ Wv++ +++g++++ +++ s+++sg a+ra+ +v +++ v+e+++d++ W ++++ ++ i + g+++ Migut.H01331.1.p 166 IAEETLAEFLGKATGTAVDWVQLIGMKPGPDSIGIVAVSRNCSGIAARACSLVSLEPT-KVAEIFKDRLSWYRDCRCLDVASIIPTRngGTIE 257 68999*****************************************************.9999999999*******8888777766555**** PP EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-T...TS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS START 93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdse...qkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181 l +++++a+++l+ Rdf+++Ry+ +l++g++vi+++S++s q+ p +vRae+lpSg+li+p+++g+s +++v+h+dl++ +++++l Migut.H01331.1.p 258 LLYMQTYAPTTLALgRDFWTLRYTTSLEDGSLVICERSLTSSyggQMGPHATCFVRAEMLPSGCLIRPCEGGGSIIHIVDHIDLDALSVPEVL 350 *************99*************************97333666658889*************************************** PP HHHHHHHHHHHHHHHHHHTXXXX CS START 182 rslvksglaegaktwvatlqrqc 204 r+l++s+ + ++k+++a+l++ + Migut.H01331.1.p 351 RPLYESSKILAQKMTLAALRHIR 373 *******************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 15.337 | 13 | 77 | IPR001356 | Homeobox domain |
SMART | SM00389 | 3.2E-15 | 15 | 81 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.67E-16 | 18 | 82 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 2.63E-16 | 18 | 78 | No hit | No description |
Pfam | PF00046 | 5.8E-16 | 19 | 76 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-18 | 20 | 76 | IPR009057 | Homeodomain-like |
CDD | cd14686 | 8.87E-6 | 70 | 108 | No hit | No description |
PROSITE profile | PS50848 | 23.648 | 156 | 384 | IPR002913 | START domain |
CDD | cd08875 | 3.26E-66 | 160 | 376 | No hit | No description |
Gene3D | G3DSA:3.30.530.20 | 1.2E-16 | 165 | 367 | IPR023393 | START-like domain |
SMART | SM00234 | 4.4E-38 | 165 | 375 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.37E-30 | 166 | 377 | No hit | No description |
Pfam | PF01852 | 1.2E-44 | 166 | 373 | IPR002913 | START domain |
Pfam | PF08670 | 5.6E-49 | 696 | 840 | IPR013978 | MEKHLA |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 842 aa Download sequence Send to blast |
MALSMQKQQQ QQQIDAGKYV RYTPEQVDAL ERVYSECPKP TSSKRQQLIR ECPILSNIEP 60 KQIKVWFQNR RCREKQRKEA SHLQTVNRKL TAMNKLLMEE NGRLQNQVTH LVHKNGSMRQ 120 HLQTVNTTAT DTSCDSAIMS GRKEQNNPTP QRPQRDANSP AGLLAIAEET LAEFLGKATG 180 TAVDWVQLIG MKPGPDSIGI VAVSRNCSGI AARACSLVSL EPTKVAEIFK DRLSWYRDCR 240 CLDVASIIPT RNGGTIELLY MQTYAPTTLA LGRDFWTLRY TTSLEDGSLV ICERSLTSSY 300 GGQMGPHATC FVRAEMLPSG CLIRPCEGGG SIIHIVDHID LDALSVPEVL RPLYESSKIL 360 AQKMTLAALR HIRQIAQETN EEVQISGGRQ PAVLRSLSQR LCRGFNDAVN GIVDDGWSII 420 SSDGAEDVTI AINLSPSKFL ASHSNTLSML PTFGGVLSAR ASMLLQNVPP ALLVRFLREH 480 RSEWADYAVD FYSAASLKSS PYAIPFAKPG GFPTSQVILP LAHTVEHEEV LEVVRLEGHA 540 FSPEDIALSR DMYLLQLCSG IDEANTGECA QLIFAPIDES FGDDAPMLPS GFRIISLDPK 600 SNGPGPTQTL DLASTLDVGR PAGGIDSTNQ NVRSVLSIAF QFTFESHYQD SVAAMARQYV 660 RSIVASVQRV ALAISPSPLG GRIVPKPSPH SPEALTLARW ICRSYRVYTG RELFEADTQA 720 SDAVLKQLWH HSDAIVCCSV KTNASAAFTF ANQAGLDMME TTLVALQDIM LEKILDESGR 780 KILLAEFSKI MQQGFAYLPG GVCNSSMGRS VSYEQAVVWK VLNDDDSNHC LAFMFMNWSF 840 V* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01331.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012830207.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein ATHB-14 | ||||
Swissprot | Q6AST1 | 0.0 | HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32 | ||||
TrEMBL | A0A022RU00 | 0.0 | A0A022RU00_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA457 | 24 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01331.1.p |
Entrez Gene | 105951337 |
Publications ? help Back to Top | |||
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