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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.H01112.1.p |
Common Name | LOC105951111, MIMGU_mgv1a004878mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
Trihelix |
Protein Properties |
Length: 507aa MW: 57125.8 Da PI: 6.9145 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H01112.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 91.7 | 7.7e-29 | 47 | 130 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+++e+laL+++r+em++++r+++lk+plW+evs+k+ e g++r++k+Ckek+en+ k++k++k+g++ r + +++++fdqle
Migut.H01112.1.p 47 RWPREETLALLKIRSEMDTAFRDSNLKAPLWDEVSRKLGELGYNRNAKKCKEKFENIYKYHKRTKDGRSIR--HKGKNYKFFDQLE 130
8*******************************************************************997..45567******97 PP
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2 | trihelix | 97.7 | 9.9e-31 | 336 | 420 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+k ev Li ++++++ +++++ k+plWee+s+ m++ gfers+k+Ckekwen+nk+yk++k+g+kkr +++s+tcpyf+ le
Migut.H01112.1.p 336 RWPKAEVESLILLKTDLDMQYEENGPKGPLWEEISACMKKLGFERSAKRCKEKWENINKYYKRVKDGNKKR-PQDSKTCPYFSMLE 420
8*********************************************************************8.99********9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010192 | Biological Process | mucilage biosynthetic process |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MLESSVFLEN SGGGASGGSA SDAAAVEFGN EGGGGEEEGS RNSGGKRWPR EETLALLKIR 60 SEMDTAFRDS NLKAPLWDEV SRKLGELGYN RNAKKCKEKF ENIYKYHKRT KDGRSIRHKG 120 KNYKFFDQLE LLDSQFSVPS TPLSQIPSYA TEMTQIATTL LPKPVTNLFQ DFTIQSELMS 180 DSTSTSSSSG KDSQGSSKKK KKKKKRKLED YLEGLVKDIL EKQGEMQNKF LEAVEKSQND 240 RMARTEAWLS QEMATIKRER QILAQERSTA SAKDAYVLDF LKKITHQDLP ITHISEILDP 300 LFNNKPCDNN EQENAIVNVN SIGEKNSSSV QTSSSRWPKA EVESLILLKT DLDMQYEENG 360 PKGPLWEEIS ACMKKLGFER SAKRCKEKWE NINKYYKRVK DGNKKRPQDS KTCPYFSMLE 420 SIYANKSKKA RNNDNNNNTD VSGGGCNLKP EQILMQMMGQ VQQQNQEQLI RGEYDDGDSD 480 RQEQEDDDVS GCDGYQVVAA NNNNMS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 198 | 206 | KKKKKKKRK |
2 | 200 | 206 | KKKKKRK |
3 | 200 | 207 | KKKKKRKL |
4 | 201 | 206 | KKKKRK |
5 | 202 | 207 | KKKRKL |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |