PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00918.1.p
Common NameMIMGU_mgv1a026129mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 389aa    MW: 43710.4 Da    PI: 7.011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00918.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1683.2e-52151412128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                        pGfrFhPtdeelv +yLk+k++++ l++ e ik+v+iyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t sg+Wkatg+d++++s
  Migut.H00918.1.p  15 LPGFRFHPTDEELVEFYLKRKLQQRALPI-ELIKQVEIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSSRPNRVTGSGFWKATGTDRPIYS 106
                       69***************************.89***************9888999*************************************** PP

               NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + +++ +glkk+Lvfy+gra kg ktdW+mhe+rl
  Migut.H00918.1.p 107 SdGTKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 141
                       956667***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-5813176IPR003441NAC domain
PROSITE profilePS5100556.5614176IPR003441NAC domain
PfamPF023657.6E-2616141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0045770Biological Processpositive regulation of asymmetric cell division
GO:0048103Biological Processsomatic stem cell division
GO:0048829Biological Processroot cap development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MNETEKSSTI DDVILPGFRF HPTDEELVEF YLKRKLQQRA LPIELIKQVE IYKYDPWDLP  60
KLASTGEKEW YFYCPRDRKY RNSSRPNRVT GSGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYRGRAAKGM KTDWMMHEFR LPSSTTDGGA LAPPRKILDK NLPLNDSWAI CRIFKKTTST  180
AHRALSHSWE TSQPIPDHGF AYGSHQTRFN LENEFQPANN SGISFPSYKN FSAATGTTST  240
FTSSDGEYFH GNLVFSPNQE VSGRSNDSTV DLSSMIFNLS SPVLADKNSE AIDFEGQFNG  300
YSGNSSNMLQ ASMNVEEEQQ AEIRKNQSNT TNIHNNNNVW ENIRSMGFPF SLPAGGQESW  360
KGNLPWDSPP CPSEISSTNY STTSVTHS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-531618019169NO APICAL MERISTEM PROTEIN
1ut4_B4e-531618019169NO APICAL MERISTEM PROTEIN
1ut7_A4e-531618019169NO APICAL MERISTEM PROTEIN
1ut7_B4e-531618019169NO APICAL MERISTEM PROTEIN
4dul_A4e-531618019169NAC domain-containing protein 19
4dul_B4e-531618019169NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00918.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098618.10.0putative NAC domain-containing protein 94
TrEMBLA0A022R0440.0A0A022R044_ERYGU; Uncharacterized protein
STRINGMigut.H00918.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22022262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.12e-97NAC family protein