PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00911.1.p | ||||||||
Common Name | LOC105961642, MIMGU_mgv1a012915mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26578.8 Da PI: 6.2408 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.7 | 2.8e-05 | 30 | 75 | 2 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 + + erE+ Rdr+N+ f L + l + ++ + Ka+iL+++v+ + Migut.H00911.1.p 30 KIHKAEREKLKRDRMNELFLDLGRTLDLD----HPNNGKASILRETVRLL 75 667889*******************9987....89999********9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.71E-4 | 26 | 82 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.2E-7 | 28 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.963 | 28 | 78 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.93E-10 | 29 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MASETADPVN VSTRKCHSSS KKNAAKIPRK IHKAEREKLK RDRMNELFLD LGRTLDLDHP 60 NNGKASILRE TVRLLGELLT QVDNLKKENT TLLSESNYVT IEKNELLEET LTLDAQIKNL 120 QREIEERADN NNCSNLDVNT QSQSNGTTHV PVEEHVSFPL VVHASESTSA VGPVFVVPLH 180 HESQLGLLNP FNIEVDMDMP KARSNVSRPR ARYPSSYDSW PSHILTTNQP NLIEDV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00911.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841332.1 | 1e-174 | PREDICTED: transcription factor bHLH47-like | ||||
TrEMBL | A0A022R299 | 1e-172 | A0A022R299_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H00911.1.p | 1e-173 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4307 | 19 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 8e-35 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00911.1.p |
Entrez Gene | 105961642 |