PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00826.1.p | ||||||||
Common Name | MIMGU_mgv1a011938mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 30622.2 Da PI: 5.3628 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 138.2 | 5e-43 | 10 | 128 | 1 | 123 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeelvv+yL++k +g+ +++ +i+e+d+yk++Pw+Lp++++ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v Migut.H00826.1.p 10 LPAGFRFHPTDEELVVHYLCRKSAGQLISV-PIIAEIDLYKFDPWQLPEMAHYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVG 101 799**************************9.88***************8888899*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvm 123 + ++ g+kk Lvfy g+ap+g dWv+ Migut.H00826.1.p 102 K--PKTLGIKKALVFYAGKAPRG-LDDWVL 128 8..778****************8.789997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-49 | 7 | 134 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 44.641 | 10 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.7E-21 | 11 | 128 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MKGGEQQLNL PAGFRFHPTD EELVVHYLCR KSAGQLISVP IIAEIDLYKF DPWQLPEMAH 60 YGEKEWYFFS PRDRKYPNGS RPNRSAGTGY WKATGADKPV GKPKTLGIKK ALVFYAGKAP 120 RGLDDWVLCR IYNKKGPLEK HYNVDHEEVQ YFSDVEEQKP NVDAAFAYTS VGVKSSPQIL 180 HFDTSESVPK LHNNTESSSS EHVLSPEVQS ESKWNDFDSC LDYQLNYTMD VAFQDDDLFS 240 SQMQQYNDEQ QLSTYQDMFA YMHKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-72 | 2 | 140 | 7 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00826.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012857590.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like isoform X2 | ||||
Swissprot | Q39013 | 5e-97 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A022PXQ6 | 0.0 | A0A022PXQ6_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H00826.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 2e-99 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00826.1.p |