PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00825.1.p
Common NameLOC105976873, MIMGU_mgv1a010993mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 296aa    MW: 33942 Da    PI: 6.6759
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00825.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1631.1e-50121352128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       p+GfrFhPtdeelvv+yL++k++g+ +++  +i+++d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v +
  Migut.H00825.1.p  12 PAGFRFHPTDEELVVHYLCRKCAGQLISI-PIIADIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVGK 103
                       89**************************9.88***************6666689*************************************98 PP

               NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          ++ g+kk Lvfy g+ap+g+kt+W+mheyrl
  Migut.H00825.1.p 104 --PKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL 135
                       ..778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-598162IPR003441NAC domain
PROSITE profilePS5100558.48611162IPR003441NAC domain
PfamPF023654.2E-2712135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MKGGGDQQLN FPAGFRFHPT DEELVVHYLC RKCAGQLISI PIIADIDLYK FDPWQLPDMA  60
LYGEKEWYFF SPRDRKYPNG SRPNRSAGTG YWKATGADKP VGKPKTLGIK KALVFYAGKA  120
PRGVKTNWIM HEYRLANVDR SASAKTNNSR LDDWVLCRLY NKKGTLEKHY NVDHKEVQYF  180
SDVEEQKPNV DAFHYTTSTS AGVKSSPQIF HFDTSESIPK LHNNTDSSSS EHVLSPEVQS  240
ESKWNDFDSC LDYQLNYTMD AAFQDVDLFT SQMQQYSDEQ ISMYQDIFAY MHKPF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-8551689174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00825.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857589.10.0PREDICTED: NAC domain-containing protein 2-like isoform X1
SwissprotQ390131e-119NAC2_ARATH; NAC domain-containing protein 2
TrEMBLA0A022Q2690.0A0A022Q269_ERYGU; Uncharacterized protein
STRINGMigut.H00825.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12392481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-121NAC family protein
Publications ? help Back to Top
  1. Florentin A,Damri M,Grafi G
    Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization.
    Dev. Dyn., 2013. 242(10): p. 1121-33
    [PMID:23798027]
  2. Jensen MK, et al.
    ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.
    FEBS Open Bio, 2013. 3: p. 321-7
    [PMID:23951554]
  3. Wang YX
    Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress.
    Mol. Biol. Rep., 2013. 40(11): p. 6451-8
    [PMID:24057250]
  4. Yang X, et al.
    Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis.
    Plant Cell Rep., 2015. 34(6): p. 943-58
    [PMID:25666276]
  5. Du Q,Wang H
    The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation.
    Plant Signal Behav, 2015. 10(10): p. e1078955
    [PMID:26340415]
  6. Takasaki H, et al.
    SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
    Plant J., 2015. 84(6): p. 1114-23
    [PMID:26518251]
  7. Liu Y,Sun J,Wu Y
    Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice.
    J. Plant Res., 2016. 129(5): p. 955-962
    [PMID:27216423]
  8. Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR
    Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining.
    PLoS ONE, 2016. 11(9): p. e0162327
    [PMID:27618630]
  9. Zhao J,Missihoun TD,Bartels D
    The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana.
    Planta, 2018. 248(4): p. 1017-1027
    [PMID:30027414]