PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Migut.H00770.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 211aa MW: 23751.3 Da PI: 8.4772

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H00770.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.1	1.2e-11	26	78	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ah +Er+RR+++ ++ Lr+llP ++K ++ +Av YIk++q Migut.H00770.1.p 26 KKSAHRDIERQRRQEMSLLYSSLRSLLPLqY---VKGKRAVSDHMHQAVIYIKHMQ 78 689************************66...99*****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.23E-11	24	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.767	25	77	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.4E-9	26	78	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.2E-10	26	96	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MLANYATEVN TTAAVVLKEN NNVESKKSAH RDIERQRRQE MSLLYSSLRS LLPLQYVKGK 60 RAVSDHMHQA VIYIKHMQMK NEEMRIKIEK LNKLTNNVSE TRSILEDRVI IEAAANSSPT 120 YCVKINVCNG GGINEILITS SSSIDNGSFS LSKVFVKLLQ RGFNVISCVS TRVDNLFLHK 180 IQIDEVIGTG QFDETCLILF ICQDINNQEK *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H00770.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857558.1	1e-134	PREDICTED: transcription factor bHLH125-like
TrEMBL	A0A022PYI2	1e-103	A0A022PYI2_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.H00770.1.p	1e-153	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	4e-20	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.H00770.1.p