PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00727.3.p
Common NameMIMGU_mgv1a007138mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 441aa    MW: 48986.3 Da    PI: 4.5823
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00727.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.79.8e-4961331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtd el+++yLk+kv gkkl + e+i+ev+iyk+ PwdLp k ++k+++ ew+fF++r+kkya+g r +rat++gyWk+tgkd++
  Migut.H00727.3.p   6 LPPGFRFHPTDVELIMYYLKRKVMGKKLLF-EAIAEVNIYKFSPWDLPdKsCLKNKDLEWFFFCPREKKYASGVRVKRATENGYWKTTGKDRP 97 
                       79*************************888.89**************96347777888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + ++++vg  ktLvf+ g+apkge+tdWv+hey++
  Migut.H00727.3.p  98 ISH-NDRKVGSVKTLVFHLGTAPKGERTDWVIHEYKI 133
                       **9.9999***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-573155IPR003441NAC domain
PROSITE profilePS5100554.5076155IPR003441NAC domain
PfamPF023659.5E-257133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MARTSLPPGF RFHPTDVELI MYYLKRKVMG KKLLFEAIAE VNIYKFSPWD LPDKSCLKNK  60
DLEWFFFCPR EKKYASGVRV KRATENGYWK TTGKDRPISH NDRKVGSVKT LVFHLGTAPK  120
GERTDWVIHE YKIVDAQLAA AGVQDTFVLC KVFKKNGPGP KNGAQYGAPF DEAEWADVED  180
DTPNQAMSLA SDGPSSLFTP GSTSALLVEG GPSPSAVHPT PTSEVLVDET DDEIVRLLES  240
FTEDDALLSN ENGINQDDLT EKGKNKRLAS WDANDIYNGL DDLNSWNSWA QMYQGTLDFS  300
GMQRDGYLLN NILPQDNSAY IELNDFLAPL NYPHKVPRTD QSPLGDIFGS HSYDNGQQFR  360
PGPSFASTNQ YSSGPNQLPM MPEGFQPGNN CLDGFQMADN QFYQGSNVAY DMDFAFGQPG  420
NNGFNSNNQD SERGRPAADN *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-46116112171NO APICAL MERISTEM PROTEIN
1ut4_B5e-46116112171NO APICAL MERISTEM PROTEIN
1ut7_A5e-46116112171NO APICAL MERISTEM PROTEIN
1ut7_B5e-46116112171NO APICAL MERISTEM PROTEIN
3swm_A6e-46116115174NAC domain-containing protein 19
3swm_B6e-46116115174NAC domain-containing protein 19
3swm_C6e-46116115174NAC domain-containing protein 19
3swm_D6e-46116115174NAC domain-containing protein 19
3swp_A6e-46116115174NAC domain-containing protein 19
3swp_B6e-46116115174NAC domain-containing protein 19
3swp_C6e-46116115174NAC domain-containing protein 19
3swp_D6e-46116115174NAC domain-containing protein 19
4dul_A5e-46116112171NAC domain-containing protein 19
4dul_B5e-46116112171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00727.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853700.10.0PREDICTED: NAC domain-containing protein 89-like isoform X2
TrEMBLA0A022Q9390.0A0A022Q939_ERYGU; Uncharacterized protein
STRINGMigut.H00727.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.45e-93NAC domain containing protein 82