PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00727.2.p
Common NameMIMGU_mgv1a007138mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 435aa    MW: 48403.7 Da    PI: 4.5744
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00727.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.79.5e-4961331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtd el+++yLk+kv gkkl + e+i+ev+iyk+ PwdLp k ++k+++ ew+fF++r+kkya+g r +rat++gyWk+tgkd++
  Migut.H00727.2.p   6 LPPGFRFHPTDVELIMYYLKRKVMGKKLLF-EAIAEVNIYKFSPWDLPdKsCLKNKDLEWFFFCPREKKYASGVRVKRATENGYWKTTGKDRP 97 
                       79*************************888.89**************96347777888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + ++++vg  ktLvf+ g+apkge+tdWv+hey++
  Migut.H00727.2.p  98 ISH-NDRKVGSVKTLVFHLGTAPKGERTDWVIHEYKI 133
                       **9.9999***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-573155IPR003441NAC domain
PROSITE profilePS5100554.5076155IPR003441NAC domain
PfamPF023659.3E-257133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MARTSLPPGF RFHPTDVELI MYYLKRKVMG KKLLFEAIAE VNIYKFSPWD LPDKSCLKNK  60
DLEWFFFCPR EKKYASGVRV KRATENGYWK TTGKDRPISH NDRKVGSVKT LVFHLGTAPK  120
GERTDWVIHE YKIVDAQLAA AGVQDTFVLC KVFKKNGPGP KNGAQYGAPF DEAEWADVED  180
DTPNQAMSLA SDGPSSLFTP GSTSALLVEG GPSPSAVHPT PTSEVLVDET DDEIVRLLES  240
FTEDDALLSN ENGINQDDLT EKGKNKRLAS WDANDIYNGL DDLNSWNSWA QMYQGTLDFS  300
GMQRDGYLLN NILPQDNSAY IELNDFLAPL NYPHKVPRTD QSPLGDIFGS HSYDNGQQFR  360
PGPSFASTNQ YSSGPNQLPM MPEGFQPGNN CLDGFQMADN QFYQGSNVAY DMDFAFGQPG  420
NNGFNSNNQD SERV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-46116112171NO APICAL MERISTEM PROTEIN
1ut4_B4e-46116112171NO APICAL MERISTEM PROTEIN
1ut7_A4e-46116112171NO APICAL MERISTEM PROTEIN
1ut7_B4e-46116112171NO APICAL MERISTEM PROTEIN
4dul_A4e-46116112171NAC domain-containing protein 19
4dul_B4e-46116112171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00727.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853699.10.0PREDICTED: NAC domain-containing protein 68-like isoform X1
TrEMBLA0A022Q8430.0A0A022Q843_ERYGU; Uncharacterized protein
STRINGMigut.H00727.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.45e-93NAC domain containing protein 82