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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.H00566.1.p |
Common Name | LOC105971809, MIMGU_mgv1a009529mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
CO-like |
Protein Properties |
Length: 340aa MW: 36975.9 Da PI: 6.649 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00566.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 27.8 | 5.1e-09 | 25 | 71 | 2 | 42 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
+ ++C+ ++ ++ + C+ ++ lC+ C + +H+ H +vp+
Migut.H00566.1.p 25 RVWMCDACDLAPAAFLCKADSASLCAACDSDIHSAnplarrHIRVPI 71
5789*****************************66788888988876 PP
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2 | CCT | 68.6 | 1.6e-23 | 291 | 334 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eK+k RkFeK+irY+sRKa+Ae+RpRvKGrF+k++
Migut.H00566.1.p 291 REARVMRYREKKKMRKFEKTIRYASRKAYAETRPRVKGRFAKRS 334
9****************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MLKVENTTGA GDAGNNWLSS SRRDRVWMCD ACDLAPAAFL CKADSASLCA ACDSDIHSAN 60 PLARRHIRVP ISSAAGNFYG HSAPGLSMGA PEAHSENDFL THHDGEDEDE AASWLLLNPV 120 KNEDNQSSHD NAPPLFGGGG AAAAVDAYLD LDDYNSCQNN QFNDHHHYNN NINHHPKLHY 180 SSVSHEKIGY GGQDSVVPIQ IQEHCFPVGL DYESSHTGYS YPTSMSSHNN VCLSPVMDVG 240 VVPESTMSEG SIISGQYQRT PKGTIDLFSG PLIQAAGVAP PPAQQLSPVD REARVMRYRE 300 KKKMRKFEKT IRYASRKAYA ETRPRVKGRF AKRSVSCAS*
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