|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.H00420.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
Family |
bHLH |
Protein Properties |
Length: 360aa MW: 39911.6 Da PI: 5.8416 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00420.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.7 | 6.6e-16 | 153 | 199 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq
Migut.H00420.1.p 153 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 199
6*************************7.....5******************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009409 | Biological Process | response to cold |
GO:0010114 | Biological Process | response to red light |
GO:0010154 | Biological Process | fruit development |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0048440 | Biological Process | carpel development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MANLYNTTTT TATATNYSPS PPPPPEPDEI SLFLQQILLR SSSSSSSPSS SSLMRRQFFA 60 ADNDHLLTEN QAPAPAPVPY PDPGQIHAPD PASGCSFAAA ANVSSSSVGN FDNEPDEYEY 120 ESEENVEALV EETIPKQTSS SRTSSKRSRA AEVHNLSEKR RRSRINEKMK ALQNLIPNSN 180 KTDKASMLDE AIEYLKQLQL QVQMLTMRNG LSLYPICLPE MLQQQQHSQT SHMRMDIFDT 240 SDKFLNTNVS KENCVKQDFS ATIGPKSSFK LEYSSQQNHF GPLDLISTTS SIEKVMPRHS 300 PNQDYIERSL IGHKAISSIP IETRKSRLKE STIEACLAGG DNLISNFVNN PMFLSHFNM*
|