|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.H00411.1.p |
Common Name | MIMGU_mgv1a016214mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
Family |
ERF |
Protein Properties |
Length: 131aa MW: 14462.2 Da PI: 8.9874 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00411.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 45.8 | 1.5e-14 | 2 | 44 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+k+g+WvAeIr+p +kr+r++lg++ ta Aa+a++ a +l+g
Migut.H00411.1.p 2 RKWGKWVAEIREP---NKRTRIWLGSYSTAVAAARAYDTAVYYLRG 44
46**********9...337*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 131 aa
Download sequence Send
to blast |
MRKWGKWVAE IREPNKRTRI WLGSYSTAVA AARAYDTAVY YLRGPTAKLN FPEDVSSSVV 60 GEVEELSAAA IREKAVEVGS RVDALQANTS AAANGGHAMN QRSWFRGYQI DLNKKPEPED 120 DPAAVEYCRR *
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AB023482 | 2e-39 | AB023482.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, clone P0680A03. |
GenBank | AK107775 | 2e-39 | AK107775.1 Oryza sativa Japonica Group cDNA clone:002-133-B12, full insert sequence. |
GenBank | AP002536 | 2e-39 | AP002536.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14. |
GenBank | AP014962 | 2e-39 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 2e-39 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G50260.1 | 8e-26 | cooperatively regulated by ethylene and jasmonate 1 |