PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00326.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 22302.9 Da PI: 10.2624 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.8 | 3.1e-10 | 100 | 157 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+ +NRe+ArrsR RK++ +e+L++ + L+a N++L ++l +++ ++se Migut.H00326.1.p 100 RKRRRMLSNRESARRSRMRKQKHTENLRNQANRLKAGNRELMNRLRFVVHQSQMVRSE 157 578999***********************************98887666666665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-13 | 96 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 98 | 161 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.4E-8 | 100 | 158 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.29E-10 | 100 | 150 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-8 | 100 | 172 | No hit | No description |
CDD | cd14702 | 5.48E-17 | 101 | 150 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 103 | 118 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MLSTFPATLS GDSFVGNFLP SFEPGFPNWE FHEPSFLFND QEPVLFSPHP SHEPVTSNSG 60 SDASNPALSP DSCEANQNQN SGSDDRNPNH NNCKKVVDER KRRRMLSNRE SARRSRMRKQ 120 KHTENLRNQA NRLKAGNREL MNRLRFVVHQ SQMVRSENEY LMSEAAVLRQ RLWDIRQLLL 180 VRHLHQQLLN PSA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 103 | RKRRR |
2 | 99 | 120 | RKRRRMLSNRESARRSRMRKQK |
3 | 112 | 119 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00326.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012856534.1 | 1e-140 | PREDICTED: basic leucine zipper 43 | ||||
TrEMBL | A0A2G9FVP9 | 1e-71 | A0A2G9FVP9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H00326.1.p | 1e-139 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 2e-31 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00326.1.p |