PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00324.1.p
Common NameLOC105973644, MIMGU_mgv1a003526mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRF
Protein Properties Length: 581aa    MW: 61945.1 Da    PI: 7.6032
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00324.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC74.51.1e-23199243145
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                       d+epgrCrRtDGKkWRCsr+ ++++k+CErH++rgr+rsrk++e 
  Migut.H00324.1.p 199 DPEPGRCRRTDGKKWRCSRDSVPDQKYCERHINRGRHRSRKPVEG 243
                       79****************************************985 PP
2QLQ61.42.5e-21136172137
               QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                       ++FT++Q+++L++Q+l+yK+++an+PvP++Ll+++++
  Migut.H00324.1.p 136 GPFTPSQWMELEHQALIYKHIVANVPVPSNLLVPLKR 172
                       59********************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.9E-13136172IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.6E-15137170IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.13137172IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.54199243IPR014977WRC domain
PfamPF088791.8E-20200242IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009624Biological Processresponse to nematode
GO:0048364Biological Processroot development
GO:0048366Biological Processleaf development
GO:0061062Biological Processregulation of nematode larval development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MDFGVVVSSN KQPSPTTEPR DENRHGSANL KHQRSEFADD SWRLPKMPKP GDEVDSTSES  60
FAAFGRSTLW PSPADDGQKM LSFSSAEPRG GDGGGGGGGG SSRSIAFSIC QDEHHSRTGG  120
GGLNGGVRGP FARLKGPFTP SQWMELEHQA LIYKHIVANV PVPSNLLVPL KRSLYAYGSY  180
ASNLLGWGPF HLGYSGSNDP EPGRCRRTDG KKWRCSRDSV PDQKYCERHI NRGRHRSRKP  240
VEGQNNGHAI VSGSSSTTSL SLSKLPSIPS SSLSSPSLVH HPFSSMQQPN SAAATDHLIT  300
RSQGFQGGLS LIPSSTTGPK SKDGPPFSTQ SQQQQQPHNV PPFVGPSQSE FGFVSSHSLL  360
NPSEERIFSY MNTTTNNTAP TTTTDSFLPY DPNLESNNNN QHSSSVHHFM DDWPKAAHQS  420
NRAPVSWPEE LKSDWTQLSM SIPMPASSQE RSTEPAHGLD QIHMGLDLGD RTHMGRDLGP  480
VNWGNAMGGP LGEVLTSTGG AGAGDTFPSG KAGWRNSGTR EIGSSPTGVL QKSTFVSLSN  540
SSSGSSPPLS AENKKVHESS ILCNDLLGSA VASSAAIQSL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00324.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854135.10.0PREDICTED: growth-regulating factor 1-like
TrEMBLA0A022RX390.0A0A022RX39_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16882357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.12e-80growth-regulating factor 1