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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.H00297.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 341aa MW: 38889.7 Da PI: 4.6415 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00297.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36 | 1.3e-11 | 170 | 213 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+++L
Migut.H00297.1.p 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMREL 213
589*********************66......***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MEITEQQSMM IEELIMAPKI DTNFPNDQFL PNHWSNLSNP FDQTLENNWH LPSPNYNNPS 60 PIISEFSYNY NNNPNCSSFG EFQPFLDALT SPDFSSFYDL PPMPAQQDYA ATTNFVQDEE 120 MRFLDTCIDN YGFQAGVEDG STTPQNHDII IEKKSNKSKK PNNGQPSKNL MAERRRRKRL 180 NDRLSMLRSI VPKISKMDRT SILGDTIDYM RELLDKIQNL REQGVDENTN KINLNGAYLK 240 ELKPNEIMQV MRNPPKFDVE RRDEDTRVEV CCTAKPGLLF STLSTMDALG LDIQQCVISC 300 FSDFSLQASC CEVSEHRSVV SIEDVKQALF RNAGYGGRCL *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 172 | 179 | ERRRRKRL |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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