PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00297.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 341aa MW: 38889.7 Da PI: 4.6415 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.3e-11 | 170 | 213 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+++L Migut.H00297.1.p 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMREL 213 589*********************66......***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.02E-14 | 163 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.402 | 164 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.0E-12 | 170 | 219 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-9 | 170 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-14 | 171 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.11E-5 | 171 | 218 | No hit | No description |
CDD | cd04873 | 4.80E-4 | 266 | 307 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence Send to blast |
MEITEQQSMM IEELIMAPKI DTNFPNDQFL PNHWSNLSNP FDQTLENNWH LPSPNYNNPS 60 PIISEFSYNY NNNPNCSSFG EFQPFLDALT SPDFSSFYDL PPMPAQQDYA ATTNFVQDEE 120 MRFLDTCIDN YGFQAGVEDG STTPQNHDII IEKKSNKSKK PNNGQPSKNL MAERRRRKRL 180 NDRLSMLRSI VPKISKMDRT SILGDTIDYM RELLDKIQNL REQGVDENTN KINLNGAYLK 240 ELKPNEIMQV MRNPPKFDVE RRDEDTRVEV CCTAKPGLLF STLSTMDALG LDIQQCVISC 300 FSDFSLQASC CEVSEHRSVV SIEDVKQALF RNAGYGGRCL * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 172 | 179 | ERRRRKRL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00297.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012856598.1 | 0.0 | PREDICTED: transcription factor bHLH61 | ||||
Swissprot | Q9LSL1 | 4e-75 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A022S002 | 1e-175 | A0A022S002_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H00297.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA789 | 24 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 2e-71 | beta HLH protein 93 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00297.1.p |
Publications ? help Back to Top | |||
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