|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.H00278.1.p |
Common Name | MIMGU_mgv1a024996mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
Family |
MYB |
Protein Properties |
Length: 258aa MW: 28936.6 Da PI: 8.2148 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00278.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ l+++v+ +G g W++++ + g++R++k+c++rw++yl
Migut.H00278.1.p 13 KGAWTKEEDQMLKKCVQTYGEGKWHLVPLRTGLNRCRKSCRLRWLNYL 60
79********************************************97 PP
|
2 | Myb_DNA-binding | 41.6 | 2.8e-13 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg + ++E +l+v+++++lG++ W+ Ia +++ gRt++++k++w+++
Migut.H00278.1.p 66 RGIFNQDEIDLIVRLHRLLGNR-WSWIAGRVP-GRTANDIKNFWNTH 110
677999****************.*********.************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MEKNKRVVGG VRKGAWTKEE DQMLKKCVQT YGEGKWHLVP LRTGLNRCRK SCRLRWLNYL 60 RPNLKRGIFN QDEIDLIVRL HRLLGNRWSW IAGRVPGRTA NDIKNFWNTH FEKKSTSPAA 120 ASGGGAGGSS RMAVVKTVNE SNIIRPRPRT FARSQTVAVL PPATNNENPM LEKNTSDLLL 180 AGPINDHNRI SNDENLPSKD DVDVEEEEDQ IDECIRWWGN LLEISENGSD PGEAYPFTGP 240 GLTNDCAAAL DDLWFNA*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JF694999 | 1e-124 | JF694999.1 Mimulus cupreus cell-line inbred line Mcu043 MYB3-like protein 1 mRNA, partial cds. |