PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.G01348.1.p

Common Name

LOC105954035, MIMGU_mgv1a006576mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bZIP

Protein Properties

Length: 439aa MW: 48047.6 Da PI: 6.6057

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.G01348.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	232	290	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l+se+ Migut.G01348.1.p 232 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTSEN 290 9***********************************************99998888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.3E-16	228	292	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.806	230	293	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.92E-11	232	286	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.4E-11	232	287	No hit	No description
Pfam	PF00170	3.4E-9	232	290	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.56E-25	233	282	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence Send to blast
MEKDKSHHCS GSSLPPSGRY SGFSPPNSSY NVKPEQSGLP NLPPLGPGGS SSEQGHFGHS 60 DARQFSHDIS RMSDNPSKNL GHRRAHSEIL TLPDDISFDS DLGVVGGFDG PSFSDETEED 120 LLSMYLDMDK FNSTSATSAF QVGESSNSLA AEPGSSSGFA SAFANQSLAD NNAAQGLSEK 180 PRIRHQHSQS MDGSTSIKAE MLMSGSEDPS SGDAKKAMSA AKLAELALID PKRAKRIWAN 240 RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLTSEN GELKIRLQTM 300 EQQVHLQDAL NDALKEEIQH LKVLTGQAIA NNGGAMMNYP AQYGAANQQQ QYYNSNNHAV 360 HTLLTAQQLQ QLQIHSQKQQ QQQHHQRQFQ QQQQQQQHQL HQQFQQQFQS QSSSMQASSV 420 QKDNIAPPNP PPDGSSKD*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence Send to blast

MEKDKSHHCS GSSLPPSGRY SGFSPPNSSY NVKPEQSGLP NLPPLGPGGS SSEQGHFGHS  60
DARQFSHDIS RMSDNPSKNL GHRRAHSEIL TLPDDISFDS DLGVVGGFDG PSFSDETEED  120
LLSMYLDMDK FNSTSATSAF QVGESSNSLA AEPGSSSGFA SAFANQSLAD NNAAQGLSEK  180
PRIRHQHSQS MDGSTSIKAE MLMSGSEDPS SGDAKKAMSA AKLAELALID PKRAKRIWAN  240
RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLTSEN GELKIRLQTM  300
EQQVHLQDAL NDALKEEIQH LKVLTGQAIA NNGGAMMNYP AQYGAANQQQ QYYNSNNHAV  360
HTLLTAQQLQ QLQIHSQKQQ QQQHHQRQFQ QQQQQQQHQL HQQFQQQFQS QSSSMQASSV  420
QKDNIAPPNP PPDGSSKD*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.G01348.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833158.1	0.0	PREDICTED: probable transcription factor PosF21
Swissprot	Q04088	1e-148	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A022RQ97	0.0	A0A022RQ97_ERYGU; Uncharacterized protein
STRING	Migut.G01348.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3965	21	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-142	bZIP family protein

Link Out ? help Back to Top
Phytozome	Migut.G01348.1.p
Entrez Gene	105954035

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]