PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00455.1.p
Common NameLOC105962903, MIMGU_mgv1a021877mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 167aa    MW: 18641.4 Da    PI: 6.7213
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00455.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000133658123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C++ F++   L  H++ H
  Migut.G00455.1.p 36 YECTFCKRGFTNAQALGGHMNIH 58
                      99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.21E-73463No hitNo description
Gene3DG3DSA:3.30.160.606.7E-53462IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.00973658IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.5523663IPR007087Zinc finger, C2H2
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
METGKSSNSS DNFVPPENDH RPENSTGDSA GVGRSYECTF CKRGFTNAQA LGGHMNIHRR  60
DKAKAKQKNR DDEITSNTPS NVSKPQENIP HHHQYQMYLP PPPPPRNPNF QTGDYLPPLR  120
RLENYDHRRV GHVADLSLRI GLSTPTTVEG GEAKENDDDV DLELRL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00455.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842704.11e-122PREDICTED: transcriptional regulator TAC1
TrEMBLA0A022QYI11e-120A0A022QYI1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21362152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.17e-17C2H2 family protein