PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00103.2.p
Common NameMIMGU_mgv1a019611mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 292aa    MW: 33320.9 Da    PI: 5.0062
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00103.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.7e-173580148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T+ Ede +v+ ++ +G++ W++Ia+ ++ gRt++++k++w+++l
  Migut.G00103.2.p 35 RGSFTPHEDETIVKFHNTFGNK-WSLIASNLP-GRTDNEIKNYWNSHL 80
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500904.101129IPR017877Myb-like domain
SuperFamilySSF466897.94E-221584IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.0E-101541IPR009057Homeodomain-like
PROSITE profilePS5129422.6393084IPR017930Myb domain
SMARTSM007172.7E-163482IPR001005SANT/Myb domain
PfamPF002495.1E-153580IPR001005SANT/Myb domain
CDDcd001673.41E-113780No hitNo description
Gene3DG3DSA:1.10.10.602.3E-224280IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MPMVKALGDL FPQTQRCGKS CRLRWINYLK SGLKRGSFTP HEDETIVKFH NTFGNKWSLI  60
ASNLPGRTDN EIKNYWNSHL SRRTYLFRST AVVDSKFIKT HPTKRKKIVT NNNNNNNNEV  120
PAKKKKITSP PPVSDERESN TLHEDSSLST CSSINTADEF MLDEEMMVWD EHTLMQFHNF  180
LQDHDNGGGG GGGGDVASSC LTPTNDEREK VIVNNNNISD EKLVKFESEE EAETTKTTTM  240
QMQYSCPSPI VIYFDDDEQF RWDFDGGFGG DEVNYPWSET KEEETMFNIW S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3zqc_A5e-17168335102MYB3
3zqc_D5e-17168335102MYB3
3zqc_G5e-17168335102MYB3
3zqc_J5e-17168335102MYB3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104125RKKIVTNNNNNNNNEVPAKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00103.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828161.11e-151PREDICTED: myb-related protein 308-like
TrEMBLA0A022RVL40.0A0A022RVL4_ERYGU; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.19e-35myb domain protein 12