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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.G00047.1.p | ||||||||
Common Name | LOC105966572, MIMGU_mgv1a022724mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 17151.5 Da PI: 9.1039 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.2 | 1.1e-10 | 26 | 85 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ +r+ +NRe+ArrsR ++++ i+ L + v +++ ++ + +++e++ ++ se+ Migut.G00047.1.p 26 EKKMKRMKSNRESARRSRMKREQHIKDLNDQVTYFKTRSSEIARKISEIEARFTAVGSEN 85 5899************************************99999999998777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.0E-12 | 23 | 87 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.8E-9 | 24 | 99 | No hit | No description |
PROSITE profile | PS50217 | 9.829 | 25 | 88 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-8 | 27 | 76 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.61E-9 | 27 | 78 | No hit | No description |
CDD | cd14702 | 1.60E-10 | 28 | 78 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 30 | 45 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MSPRKINNIT SSSEDDGNRS TAITDEKKMK RMKSNRESAR RSRMKREQHI KDLNDQVTYF 60 KTRSSEIARK ISEIEARFTA VGSENRILRM KGEDLKKRLE LLEEMLASDH QVNDDCLLMD 120 ILQDPLIKPW MQHTFDSQTI DGIYQF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 39 | 46 | RRSRMKRE |
2 | 40 | 45 | RSRMKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.G00047.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012846594.1 | 1e-104 | PREDICTED: ocs element-binding factor 1-like | ||||
TrEMBL | A0A022QLR7 | 1e-103 | A0A022QLR7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.G00047.1.p | 1e-104 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15128 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 5e-16 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | Migut.G00047.1.p |
Entrez Gene | 105966572 |