PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F02133.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 483aa    MW: 53940 Da    PI: 7.1562
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F02133.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.8e-3154111260
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                       +Dg+ WrKYGqK+vkgsefprsYYrCt ++C vkkkve+s+ d++++ei+Y+g+Hnh+k
  Migut.F02133.1.p  54 EDGFFWRKYGQKHVKGSEFPRSYYRCTDTNCDVKKKVECSQ-DGQITEIVYKGSHNHPK 111
                       7***************************************9.***************85 PP
2WRKY104.45.9e-33233291159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++prsYY+Ct+++C+v+k+ver+aed k v++tYeg+Hnh+
  Migut.F02133.1.p 233 LDDGYKWRKYGQKVVKGNPNPRSYYKCTTPNCSVRKHVERAAEDIKSVITTYEGKHNHH 291
                       59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-2742112IPR003657WRKY domain
PROSITE profilePS5081122.44648112IPR003657WRKY domain
SuperFamilySSF1182902.09E-2448112IPR003657WRKY domain
SMARTSM007748.1E-3453111IPR003657WRKY domain
PfamPF031061.1E-2454110IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.1E-35218293IPR003657WRKY domain
SuperFamilySSF1182904.71E-28226293IPR003657WRKY domain
PROSITE profilePS5081136.288228293IPR003657WRKY domain
SMARTSM007741.3E-36233292IPR003657WRKY domain
PfamPF031061.2E-24234291IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    Send to blast
MSKMSGNSNS VQELSGSTVN HNPNHQEKVN KGGGGLSSSS SYIVANEMQA KYSEDGFFWR  60
KYGQKHVKGS EFPRSYYRCT DTNCDVKKKV ECSQDGQITE IVYKGSHNHP KPHNSSSGAP  120
DQGDAFIPDD NGGPLSFHND FKDPQPRLMV SMLDEAFEPS ILCIQDGGGD DANQNGASPD  180
SISLNDEDDD QNAECDQPKK RKRESVVPNE TVVPRSTREP KVVVQIESDI DILDDGYKWR  240
KYGQKVVKGN PNPRSYYKCT TPNCSVRKHV ERAAEDIKSV ITTYEGKHNH HVPCTTKTTN  300
HPNSDAAAAI NNNNNDAPIP KSGNKVHLPS LFNMEAKANL NNYGNEMMNP NLPPPAHGTS  360
SSSVYQPAVS LHPYHSMHYS SYMRNSNYGI NYSSKLCPTY PDYMQLHYSQ MNNINHISAP  420
GTNHHHHHHH HHQQQQQHVP LAATNYYHNN NYPTTQTPTR GQEQSRDNFQ SNTMKPKEEP  480
NG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-3438293277Probable WRKY transcription factor 4
2lex_A2e-3438293277Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F02133.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834461.10.0PREDICTED: probable WRKY transcription factor 25
SwissprotQ6IEQ73e-71WRK24_ORYSJ; WRKY transcription factor WRKY24
TrEMBLA0A022RGZ30.0A0A022RGZ3_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F02133.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-62WRKY DNA-binding protein 3
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Zhang ZL, et al.
    A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
    Plant Mol. Biol., 2009. 70(1-2): p. 139-51
    [PMID:19199048]
  3. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]
  4. Zhang L, et al.
    Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
    Plant Sci., 2015. 236: p. 214-22
    [PMID:26025535]