 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.F02018.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
AP2 |
| Protein Properties |
Length: 489aa MW: 52793 Da PI: 7.8703 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.F02018.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.5 | 6.2e-17 | 174 | 223 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Migut.F02018.1.p 174 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 223
78*******************......55************************997 PP
|
| 2 | AP2 | 38.7 | 2.5e-12 | 266 | 316 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV+ +k grW+A+ + +k+ +lg f+ + eAa+a+++a+ k +g
Migut.F02018.1.p 266 SKYRGVTLHK-CGRWEARMGQF--L-GKKYMYLGLFDNEVEAARAYDKAAIKCNG 316
89********.7******5553..2.26**********99**********98766 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 489 aa
Download sequence Send
to blast |
MLDLNVDAVL SVDSTSCGGG AGRGNTAATA DSVASTTTST TNNAAFPSSA GADEVDCNSS 60
TRVRHSVSTL NFSILDKSVI EIEDEVDNDV INCRSELQLF PMGVSSSPPQ SLSMSPSLVR 120
AKYWLNLSVP EVPGGGGGGL ELGIYKAAQL PAATNQAPQP QVKKSRRGPR SRSSQYRGVT 180
FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVEADINF TIADYDEDMS 240
QMKNLTKEEF VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YMYLGLFDNE 300
VEAARAYDKA AIKCNGSEAV TNFEPSNYDR EMNMSSGIGS NLDLNLGISL STDGQQGYET 360
TRNLHFPHVS NELPDGKRIK IETASASPHE LLMSTKGAPP MWPIVYSGFA PNSKERATVM 420
SGEAVPLPGY ANWPWKMPSH GVGVVTPMPF ISASAASSGF SSNNASPYLN SLVSRTPQFP 480
ASAFNTLH*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Involved in spikelet transition. Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q2TQ34}. |
