PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01767.1.p
Common NameLOC105955688, MIMGU_mgv1a000118mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 1736aa    MW: 190216 Da    PI: 6.0913
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01767.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.5e-09828870246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++W++eE e+++d  + +G++ +k+Ia+ +  ++t  +c+++++k
  Migut.F01767.1.p 828 NPWSAEEREIFIDNLAIYGKD-FKKIASFLA-HKTIADCIEFYYK 870
                       69*****************99.*********.***********98 PP
2Myb_DNA-binding26.21.8e-0810461085445
                        S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding    4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45  
                        WT eE  ++v+av  +G++ ++  ++ +  +R+  qck ++ 
  Migut.F01767.1.p 1046 WTDEEKSIFVQAVSTYGKD-FAMLSQSVR-TRSSDQCKIFFS 1085
                        *****************99.*********.********8775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.44E-13813874IPR009057Homeodomain-like
PROSITE profilePS5129316.73825876IPR017884SANT domain
SMARTSM007172.1E-11826874IPR001005SANT/Myb domain
PfamPF002494.1E-7828870IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.5E-5828873IPR009057Homeodomain-like
PROSITE profilePS5129312.27810411092IPR017884SANT domain
SMARTSM007171.6E-610421090IPR001005SANT/Myb domain
SuperFamilySSF466891.56E-910431092IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-510441086IPR009057Homeodomain-like
PfamPF002491.8E-610461084IPR001005SANT/Myb domain
CDDcd001671.20E-510461084No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1736 aa     Download sequence    Send to blast
MPPEQVPWDR RDFRKHERSG SDPRFGGGGF GGGGGGGPNR WREQHHHPHA PPPHPPPYQT  60
HHNHQQQRWY SDFRSSRPIP PGQHKQGGWH MYPDESGHGF MPFGSRYGDR NLDDDNFRPF  120
ASRGEGNGRY LRNSRENRAS FSQKDWRSPS SEPAASSSGP GRPTIEVNNQ KSVENNQTSH  180
NNDSKSNDSS HLLPDSLPGQ SQPLVKEKHE KDDDIADVPA SSGQKNEREN GQESVDWKPL  240
KWTRSGSMPS RSPGVAHSNS SKGVVVDSVE IVAELQHKNV KPIQSPAAFC AVSTAPAPAP  300
APLDENISRK KPRLGWGEGL AKYEKKKVEG PEDIETEYGL VVSVSNPETV KSPSVNLLDK  360
SPRVASSSDC ASPATPSSVA CSSSPGIEEK ESVTAAKVDH DTTSLSCSPN IMSQTNYEGP  420
TFNLENLDLT SIDKLSTLIN EFLQSDDPSS VETGYVQTIS MNKLLVWKVD ILKALEVTES  480
EIDSLETELK SLIAEPRSFC AQPVTSSLLP EDCHLKPGEE QVTDSSFTVG SAPLQVVLPG  540
DMTVENMPAG LDDEHVAVKD EEIDSPGSAT SKLVEVLPSV EETVPSVTTE CGEELMNLDN  600
DPSNSGTCLE YGLSDEDNAC RIVINFENLG KVGCVLCDMG HIYKSVLASN KDSMHEAFQE  660
LNKLLPAQQC LFDIPTASGV SSSQSELSVI KERFLMRKRT LQFKQKVITL KFKVFQHFWK  720
EGRIVSIRKL RGKSHKKFDQ SRTGYKKNRY SSRSKFFCSA GSPRTVSAEE VIDFVNRLLS  780
ESPFKLCRNT LRMPALILDK EIKMSRFISN NGLVEDPCAA EKGRSFSNPW SAEEREIFID  840
NLAIYGKDFK KIASFLAHKT IADCIEFYYK NHKSECFERA RKKPDFAKQS KSQSTTYLVG  900
TGKRWNREAN AASLDLLGEA SMMAANVNDG IDIQQKCTSR IFFGGSSSQK AQRVDNGPLQ  960
RSNSLDMYSN ETVAADVLAG ICGSLSSEAM SSCITSSVDP AADGQQDWKS QRVSSCVKRP  1020
LTPDVTQNID DECSDESCWE MESADWTDEE KSIFVQAVST YGKDFAMLSQ SVRTRSSDQC  1080
KIFFSKARKC LGLDQIQPEG GNAVSADING GGSDTEDACV VQTGSVVCDD AECKMEEDLP  1140
PPNMKSSHES GMAGTHDLKP DFKLCEENTQ PCATADSMAA ELVSQNLSMG DNQVNDNANS  1200
RERNGECRSV LENRTLVLSS NTEPVRVEEG NDLGRLNGSN EAALPEVSNG RPCEENDGHG  1260
LILPLDNLDN RKVEDRVADS SEATALNCAA REMKSEPQLA AGNGRHPSVD SQKGADLETT  1320
SSVEKSHVIP LRQNGHFALV DSSTLFSVPI KYQRHSSTNA LSSVGANGIS EKHSQKFSKK  1380
GDYQQQQQSL SHSLSDPVES SQILRGYPVP VQTVKEINGD LNWKKHVLHQ NVSKSEGKLH  1440
SDRHTDFSLQ KCSSSSRNQS GIVQATFPIK EQSRNDSRPR SGSSSDVDKP SRSGDVKLFG  1500
KIIISSQDKA SSRLQENGDS NGPQHKSGSQ SLNLKFGSDH KVNIDSSQSK FDYSNYLGSD  1560
NIALRGFEYT GFPPLPDSTL LLNKYPAAFR NHHSIMPTVK LEQQPHLHGL IGNHHHPPLN  1620
AVSVYPSGDL QQPFTMDMKK QTQQDVLYSE MQIRNGFDVM QQQQGRGGMV GINVVGRGGG  1680
GVVVGGQCSS GVSDPVTAIK MHYAKAQNFS IQAGNVIRED DNNNSTWRSS GDVGR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C7e-14788878494NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D7e-14788878494NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01767.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834923.10.0PREDICTED: uncharacterized protein LOC105955688
TrEMBLA0A022RLK20.0A0A022RLK2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59042332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-135MYB family protein