PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01751.1.p
Common NameLOC105955700, MIMGU_mgv1a010405mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 314aa    MW: 34562.3 Da    PI: 5.4171
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01751.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.73.2e-18237270134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Migut.F01751.1.p 237 CKHCEITKTPQWRAGPTGPKTLCNACGVRYKSGR 270
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169926.3E-721310IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011411.53231267IPR000679Zinc finger, GATA-type
SMARTSM004013.7E-17231281IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.105.7E-15235268IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577161.38E-14235294No hitNo description
CDDcd002021.86E-14236283No hitNo description
PfamPF003206.6E-16237270IPR000679Zinc finger, GATA-type
PROSITE patternPS003440237262IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MEPNFMDEID CGNFFDQIDD LIEFPPDNED VGGIFVNSDS SKDFPSMWND DALPESDHLF  60
SANAASDLSA ELSVPYEDIV QLEWLSTFVE DSFSGGGMTI AAKENLREHK NEPTSHTTYQ  120
FQTSSPVSVL ESTSSSSSTT SVGQTTAHLP PTHRGPQRAR SKRPRPSTFN PRPTTIPSFV  180
DTTPQFSSET EIFVEEAPPL ATNKIPKRKK MKKTPPSNRE DDDNEGGAHG DPPVRKCKHC  240
EITKTPQWRA GPTGPKTLCN ACGVRYKSGR LFPEYRPAAS PTFVPALHSN SHKKVVEMRT  300
KVGPAKPEFD ASF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01751.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703066e-32HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834937.10.0PREDICTED: GATA transcription factor 8-like
TrEMBLA0A022RJB20.0A0A022RJB2_ERYGU; GATA transcription factor
STRINGMigut.F01751.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23452358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-40GATA family protein