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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F01201.1.p | ||||||||
Common Name | MIMGU_mgv1a021442mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 26479.2 Da PI: 6.1582 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.6e-11 | 54 | 106 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+++ ++ Lr+llP ++K ++ +Av+YIk++q Migut.F01201.1.p 54 KKSMHRDIERQRRQEMSLLYASLRSLLPLeY---VKGKRAVSDHMHQAVNYIKNMQ 106 6899*************************77...99******************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.32E-12 | 52 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.84E-8 | 52 | 109 | No hit | No description |
PROSITE profile | PS50888 | 13.071 | 53 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.8E-8 | 54 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-9 | 54 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0094 | 59 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MFRSQNDNEG VVLFNEGPSI LISDEQDKIL EELLADYATE VNATAEENNN VESKKSMHRD 60 IERQRRQEMS LLYASLRSLL PLEYVKGKRA VSDHMHQAVN YIKNMQKKIG EMRIKRDELN 120 KLSNNVSETR EDRVIIEAAN SSPTFCVKIN LCINGGIFEI LISSSIIDKG SFSPSKVFDK 180 LLQRGLNVIS FVSTRVDKLF LHKIQIQEND FTSNIDLTKL EEELVNVMKR V* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F01201.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012839881.1 | 1e-168 | PREDICTED: transcription factor bHLH36-like | ||||
TrEMBL | A0A022R577 | 1e-161 | A0A022R577_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F01201.1.p | 1e-167 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 6e-29 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.F01201.1.p |