PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01083.1.p
Common NameLOC105977936, MIMGU_mgv1a011457mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 282aa    MW: 31387.3 Da    PI: 6.8592
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01083.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.1e-123074147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  Migut.F01083.1.p 30 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74
                      789*****************77.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.16E-162480IPR009057Homeodomain-like
PROSITE profilePS5129413.8292579IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-62782IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-182877IPR006447Myb domain, plants
SMARTSM007175.1E-102977IPR001005SANT/Myb domain
PfamPF002493.9E-103074IPR001005SANT/Myb domain
CDDcd001679.26E-83275No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MALSNTVDTT SFLEDPNTKI RKPYTITKSR ESWTEPEHDK FLEALQLFDR DWKKIEAFVG  60
SKTVIQIRSH AQKYFMKAQK SGNNEHLPPP RPKRKAAHPY PQKASKIAPV VPQAILSFQV  120
SPTGIPDPGF VRRPDSSSLQ AHRDIAVWTD NSVHTNNNSH DIRGDIRSAG LSVPVINSCS  180
IDDSTQRTMS TALPDFAQVY SFIGSVFDPN VSDHLQKLKN MDPIDIETVL LLVRNLSINL  240
ASPDFEDHKK LLSSNELDPE KHNACVDTDP TCGGQFKDDA S*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01083.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858788.10.0PREDICTED: protein REVEILLE 6-like isoform X1
SwissprotQ8H0W32e-94RVE6_ARATH; Protein REVEILLE 6
TrEMBLA0A022PZD80.0A0A022PZD8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9982478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-82MYB_related family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL
    The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.
    Plant Physiol., 2017. 173(4): p. 2308-2322
    [PMID:28254761]