PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00900.2.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 669aa    MW: 74603.9 Da    PI: 4.3001
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-10497540146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       + rW+++E el+++a  q+G++  + I + ++ gRt+ q+k+++ k
  Migut.F00900.2.p 497 KSRWSKQETELFYEAMGQFGTD-LSMIQQLFP-GRTRRQIKLKYKK 540
                       689*******************.*********.***********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF159636.6E-29490574No hitNo description
Gene3DG3DSA:1.10.10.601.7E-7494540IPR009057Homeodomain-like
PROSITE profilePS512939.35495543IPR017884SANT domain
SMARTSM007172.9E-8496544IPR001005SANT/Myb domain
SuperFamilySSF466891.87E-10498546IPR009057Homeodomain-like
CDDcd001673.52E-6499540No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MDVDLDIFDD ILPNQPAARK VKFQPKSKPK PKFQPKSKSQ PPRKEPAAAS VSSSQAVQTI  60
GSAQSELSDP VPTTKLSDHG SEVVANDNGG PHSTAEKSVG ENADILTGFE SLGGVLPQTN  120
SDKECTVPSS EAVDLNPTTA SEPIVSSCDG RDHILERGLG SEEKDSLDSM NTTELTTKSG  180
QRTEKNQPEP NIQMHKEICE ANESVSDSFG PQSVPPETGY AEQDSIPISE QDDVLDLSSL  240
GITHTLPEEG NLMEMSQLDS DINLEGFAEV PTKLTSRRAK TGSNISHSEP DPSPQQQNAS  300
TSNQENETDR LLRPRKGKTN FCELVDEDED EVLASGDFSE EFHPNSATEE GNINNEEFQV  360
ENEQQMKKGK RKSDKTDDGK PPRKRKTAKE ATNQDAGAKR KRFPHSTRRR QVDKVLLETP  420
EDDIDYQSVP LRDLILLAEH REKQTKKEEA AVRAQAQAAK QSNGLYDEED TSNQDGDTAE  480
DTTLYFNYQT YMDKTPKSRW SKQETELFYE AMGQFGTDLS MIQQLFPGRT RRQIKLKYKK  540
EERQQPLRLR EALTNRSKDL SHFKRVIESL KQNAAEENEN ADKDDLTDLW GNEEEADEGT  600
SNADKDDMSD LKGNDVADEG ISNADDEEAK DEHIEEEKNE NSTEVQNPLE PDDEDDDLFL  660
WSQYKSDT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1379385KPPRKRK
2383401KRKTAKEATNQDAGAKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858619.10.0PREDICTED: transcription factor TFIIIB component B'' homolog isoform X2
TrEMBLA0A2G9GU170.0A0A2G9GU17_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-42MYB_related family protein