PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00900.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 672aa    MW: 74903.3 Da    PI: 4.3001
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-10500543146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       + rW+++E el+++a  q+G++  + I + ++ gRt+ q+k+++ k
  Migut.F00900.1.p 500 KSRWSKQETELFYEAMGQFGTD-LSMIQQLFP-GRTRRQIKLKYKK 543
                       689*******************.*********.***********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF159636.7E-29493577No hitNo description
Gene3DG3DSA:1.10.10.601.7E-7497543IPR009057Homeodomain-like
PROSITE profilePS512939.35498546IPR017884SANT domain
SMARTSM007172.9E-8499547IPR001005SANT/Myb domain
SuperFamilySSF466891.87E-10501549IPR009057Homeodomain-like
CDDcd001673.41E-6502543No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    Send to blast
MDVDLDIFDD ILPNQPAARK VKFQPKSKPK PKFQPKSKSQ PPRKEPAAAS VSSSQAVQTI  60
GSAQSELSDP VPTTKLSDHV ISGSEVVAND NGGPHSTAEK SVGENADILT GFESLGGVLP  120
QTNSDKECTV PSSEAVDLNP TTASEPIVSS CDGRDHILER GLGSEEKDSL DSMNTTELTT  180
KSGQRTEKNQ PEPNIQMHKE ICEANESVSD SFGPQSVPPE TGYAEQDSIP ISEQDDVLDL  240
SSLGITHTLP EEGNLMEMSQ LDSDINLEGF AEVPTKLTSR RAKTGSNISH SEPDPSPQQQ  300
NASTSNQENE TDRLLRPRKG KTNFCELVDE DEDEVLASGD FSEEFHPNSA TEEGNINNEE  360
FQVENEQQMK KGKRKSDKTD DGKPPRKRKT AKEATNQDAG AKRKRFPHST RRRQVDKVLL  420
ETPEDDIDYQ SVPLRDLILL AEHREKQTKK EEAAVRAQAQ AAKQSNGLYD EEDTSNQDGD  480
TAEDTTLYFN YQTYMDKTPK SRWSKQETEL FYEAMGQFGT DLSMIQQLFP GRTRRQIKLK  540
YKKEERQQPL RLREALTNRS KDLSHFKRVI ESLKQNAAEE NENADKDDLT DLWGNEEEAD  600
EGTSNADKDD MSDLKGNDVA DEGISNADDE EAKDEHIEEE KNENSTEVQN PLEPDDEDDD  660
LFLWSQYKSD T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1382388KPPRKRK
2386404KRKTAKEATNQDAGAKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858615.10.0PREDICTED: transcription factor TFIIIB component B'' homolog isoform X1
RefseqXP_012858617.10.0PREDICTED: transcription factor TFIIIB component B'' homolog isoform X1
RefseqXP_012858618.10.0PREDICTED: transcription factor TFIIIB component B'' homolog isoform X1
TrEMBLA0A2G9GU170.0A0A2G9GU17_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59022326
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-42MYB_related family protein