PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00663.1.p | ||||||||
Common Name | LOC105977440, MIMGU_mgv1a012796mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26591.2 Da PI: 7.3914 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.7e-14 | 62 | 107 | 3 | 53 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+E+rRRdriN +++Lr+l+P + +K++Ka L +Ave Ik+ Migut.F00663.1.p 62 RSHSEAEKRRRDRINAQLSTLRKLIPMS-----EKMDKAVLLGHAVEQIKE 107 78*************************8.....8***************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.7E-13 | 54 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.574 | 59 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-13 | 62 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.29E-11 | 62 | 107 | No hit | No description |
Pfam | PF00010 | 2.6E-11 | 62 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.6E-12 | 65 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:3.30.70.260 | 4.0E-6 | 149 | 205 | No hit | No description |
CDD | cd04873 | 7.91E-8 | 149 | 191 | No hit | No description |
SuperFamily | SSF55021 | 5.95E-5 | 149 | 208 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MENCFWAELE DQYKDNSLMV PSSWLSPSDA LQYHCYNPAA VAPPWAPPFE GSPEERAATA 60 SRSHSEAEKR RRDRINAQLS TLRKLIPMSE KMDKAVLLGH AVEQIKEQSK RAKEVSKLST 120 IPTENDQVTI IDDHSNTDKE SHIIQMKATI CCDDRPELLS EINGAIKGLG LTVMEAEITG 180 LGGRVNSSFV VCANVKNVCI ASLKQSIKLA LGRVVLSSGD SSYCVRSKRQ RFFYPNNSY* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00663.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC182573 | 0.0 | AC182573.2 Erythranthe guttata clone MGBa-78L5, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858204.1 | 1e-180 | PREDICTED: transcription factor bHLH51 | ||||
TrEMBL | A0A022PX04 | 1e-178 | A0A022PX04_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F00663.1.p | 1e-179 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5820 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-41 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00663.1.p |
Entrez Gene | 105977440 |