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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.F00465.1.p |
| Common Name | MIMGU_mgv1a020345mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
NAC |
| Protein Properties |
Length: 353aa MW: 41236 Da PI: 6.7431 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.F00465.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 180.8 | 3.6e-56 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+ppGfrFhPtdeelv++yL++k+++++++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk
Migut.F00465.1.p 7 VPPGFRFHPTDEELVDYYLRRKINSRPIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDK 98
69****************************.9***************954555442556********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle
Migut.F00465.1.p 99 AIYS-KNDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
****.8899****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MNTFSHVPPG FRFHPTDEEL VDYYLRRKIN SRPIDLDVIK DVDLYKIEPW DLQELCRIGT 60
EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKNDLIGMR KTLVFYKGRA 120
PNGQKSDWIM HEYRLETDEN GAPQEEGWVV CRVFKKRIAT MRRINEHDSP IWYEDQVSFM 180
PDHRIDSPNL SYHHHHNNIP YNNNNNSCKK KEMDLHLYGI NNNGMPPPHH FLDHHHLPHL 240
DESPKMPFYG GLNNLNPGDQ EQMVMHQTLL DHNHRNIDQS IILSEDQVTD WRVLDKFVAS 300
QLSHEEISKG INTFHASDEE LSNVIGRNRN KGEIALANTS ASSSSCQNEM WK*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-49 | 7 | 162 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-49 | 7 | 162 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-49 | 7 | 162 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-49 | 7 | 162 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-49 | 7 | 162 | 17 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-49 | 7 | 162 | 17 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
