PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Migut.F00404.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 239aa MW: 27226.2 Da PI: 9.3252

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F00404.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	67	119	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++r h e+Er+RR++i + ++ Lr++lP+ ++K s + +A +YI++ q Migut.F00404.1.p 67 KKRLHREVERQRRQEISTLYASLRSVLPPqH---IKGKRSTTDQIDEAAKYIRYVQ 119 6788***********************55...*****************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.078	66	118	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.79E-9	66	123	No hit	No description
Pfam	PF00010	3.3E-9	67	119	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.22E-12	67	136	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.6E-10	68	136	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.4E-4	72	124	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MESTSSFSFL QQEDELRILN FPELATIWDD VGFDQIPPPK CIDLGDNKNG KIPKKLEKNI 60 IEDQLKKKRL HREVERQRRQ EISTLYASLR SVLPPQHIKG KRSTTDQIDE AAKYIRYVQN 120 NIKELGIKIE NLKRWSTKNE SEKGNPSKIL PVVNVNVTVQ TCSAGVEVLI STSGDILALS 180 RITQLLHQQG LTVVSCSFTK FDGRLLYTIQ SEVLDYNIAG VDIQNLQRKL QDKIRAFY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	78	KRLHREVERQRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F00404.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012852331.1	1e-175	PREDICTED: transcription factor bHLH36-like
TrEMBL	A0A022QBP4	1e-154	A0A022QBP4_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.F00404.1.p	1e-175	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	1e-35	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.F00404.1.p