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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.F00397.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MIKC_MADS |
Protein Properties |
Length: 212aa MW: 24672.3 Da PI: 9.3599 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.F00397.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 94.6 | 4.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
krien s rqv+fskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss
Migut.F00397.1.p 9 KRIENASSRQVSFSKRRNGMLKKAYELSVLCDAEVALIIFSPKGRLYEFSS 59
79***********************************************96 PP
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2 | K-box | 67.8 | 3.7e-23 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99
e+++++l++e++ + k+ie L++++R+llG +L+++s++eLq+ e++Lek +++iRs+K +l++e+ie+l kek l een++L +k+e
Migut.F00397.1.p 81 EVEEHMQQLKNEAELMSKKIELLENSHRKLLGHNLGDCSMEELQETENKLEKTINTIRSRKAQLFKEEIEKLHAKEKILLEENERLLEKME 171
567889********************************************************************************99986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MVRGKVEMKR IENASSRQVS FSKRRNGMLK KAYELSVLCD AEVALIIFSP KGRLYEFSSS 60 NMQKSIQKYL ESRRNRNTGI EVEEHMQQLK NEAELMSKKI ELLENSHRKL LGHNLGDCSM 120 EELQETENKL EKTINTIRSR KAQLFKEEIE KLHAKEKILL EENERLLEKM ESWKTHALEK 180 QREIGSYSQI TQTAEVETEL FIGLPTTRNG R*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
1tqe_R | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
1tqe_S | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_A | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_B | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_C | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_D | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_E | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
6c9l_F | 2e-20 | 1 | 71 | 1 | 71 | Myocyte-specific enhancer factor 2B |
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Functional Description ? help
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Source |
Description |
UniProt | MADS-box transcription factor that acts with AGL71 and AGL72 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1 (PubMed:21609362). Plays a role in controlling flower organ senescence and abscission by repressing ethylene responses and regulating the expression of BOP2 and IDA (PubMed:21689171). {ECO:0000269|PubMed:21609362, ECO:0000269|PubMed:21689171}. |