PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00325.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 618aa    MW: 69234.6 Da    PI: 9.5144
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00325.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000857798223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      kC++C++ F ++ n++rH r+H
  Migut.F00325.1.p 77 KCEKCSQEFCSPINYRRHSRVH 98
                      7*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.0787698IPR007087Zinc finger, C2H2
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    Send to blast
MPATKLYSSG TLNAMKSGGG NDPLDTLIRQ ATGKEPLLPF SKTVESPVQW IQLLHALEQP  60
DLPGWPLLAP VKVQMQKCEK CSQEFCSPIN YRRHSRVHRR SLNINKECHK NRDLLAAFWD  120
KLSVEMAKEV VSFADVMLKD IIQAKPSRLP ISSQELFSIL DDASERTFLC AGTAESMQTF  180
VFYGETTKDS TDLKNLVATT SFLLEQKLMK AWIADKDAEA LRCQKLLVEE EEAAQRRQAL  240
LLERKRQKKR RQKEQKVREQ FDGCNEDLNV IVDVVDRPTS TEASGPSSPS DSSSSLTDRP  300
TNLDSILEPM LPQSKESDQD IEANVDFSTE HVEKGDSHTK KLQMVVVNSH RQLTTNRWQI  360
PKSQRNSQHG LHVNPNLQTL KPEPVRKLGP SKDRSLMNGS KVWTKKLKID SDGEKTKPPP  420
LQREISHQIK ENNCEVIIGS ISVALNGCVA RNQDSSTDAQ DNGNTQHPII LKKKNASEKP  480
VKANNVQSGT TRVAYKLWRP REIKSITPVD RVNGDSQISG QTRFDEDAGC DNTKQYRVRS  540
DENGGQQCMP FSSNAAKEFL AKRWKEAIAA DHVKLVLSKG HEQPLPGCSG RSVQVQFSKK  600
SDKSVKLKYI PKQKAVA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243249RKRQKKR
2244251KRQKKRRQ
3247252KKRRQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00325.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852268.10.0PREDICTED: uncharacterized protein LOC105971892 isoform X2
TrEMBLA0A022QF310.0A0A022QF31_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37222128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-77C2H2-like zinc finger protein