PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00285.2.p | ||||||||
Common Name | LOC105971905, MIMGU_mgv1a009601mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 296aa MW: 32743.7 Da PI: 6.106 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.2 | 6.9e-12 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W++ E++++++a +++ + Wk+I + +g +t q++s+ qky Migut.F00285.2.p 56 RESWSEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 100 789*****************77.*********.*************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.09E-15 | 50 | 106 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 13.433 | 51 | 105 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-5 | 53 | 106 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.3E-18 | 54 | 103 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 2.0E-9 | 55 | 103 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.2E-9 | 56 | 100 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.34E-7 | 58 | 101 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0046686 | Biological Process | response to cadmium ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MVSENTKPAE GFFLDPTGMA LPNVGLFSSP ATGDTPSPLE DPSKKIRKPY TISKSRESWS 60 EPEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKSGTN EHLPPPRPKR 120 KSAHPYPQKA SKAAPVVSPE VSSFQASPSS AFRHPDAAVP IPVLTDKPVQ NNTFPHAEGN 180 TRSAGQPLAN IYPCSSNESA PRNRNTVLPD FSQVYGFIGS VFDPNVTGHL QNLKKMDPID 240 IETVLLLMRN LSINLASPDF EDHRRLLSSY EIDTEKDNDF DVTDSILDSE SEDAT* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00560 | DAP | Transfer from AT5G52660 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00285.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852283.1 | 0.0 | PREDICTED: protein REVEILLE 6-like | ||||
Refseq | XP_012852284.1 | 0.0 | PREDICTED: protein REVEILLE 6-like | ||||
Swissprot | Q8H0W3 | 1e-105 | RVE6_ARATH; Protein REVEILLE 6 | ||||
TrEMBL | A0A022QF70 | 0.0 | A0A022QF70_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 1e-108 | MYB_related family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00285.2.p |
Entrez Gene | 105971905 |
Publications ? help Back to Top | |||
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