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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.F00016.2.p |
Common Name | LOC105964100, MIMGU_mgv1a003622mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 528aa MW: 58025 Da PI: 4.5689 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.F00016.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.2 | 1.1e-11 | 335 | 377 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L
Migut.F00016.2.p 335 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 377
79*********************66......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 528 aa
Download sequence Send
to blast |
MLPPRSVWMD GEEEEEEEAA PMMISSSWNN NNNNEMDDAE MNMNMNASLS SFKSMLDNNP 60 VDSSSSSAAA AAAAFINNNG NASASPFYNI NNDFSTNHLY FNPPLDLDSS SSLSNPPFIL 120 DNHNQMPPNN KSLVIPSLFN NIFDNPFDFS SCDPPSFFPS LDPPPPPPPL FMGPAAAFDA 180 SLTSLFHPTP DFFPLPHDTT SAAPFFEGFD LTNRSKLLRP LQVSPPLGAP PTLFQKRAAL 240 RHTSKSDQGL TSLDDTVGME ELEWGKKRKR NYEDDDEDEM DDEMAAAADI STINYDSDEP 300 TDNKLGGDDN ANSSITVGAG LKGKKKGGMP AKNLMAERRR RKKLNDRLYM LRSVVPKISK 360 MDRASILGDA IDYLKELLQR INDLHNELEG TTPSSSSLGS MMQHQSTASF HPLTPTPPTL 420 PYRIVKEELC ASSTPSPKNQ PAKVEVRLRE GRGVNIHMFC ARRPGLLLST MRALDNLGLD 480 IQQAVISCFN GFALDVFRAE QCREGQDVSP EQIKAVLLDS AEFHGVM*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 323 | 342 | KKKGGMPAKNLMAERRRRKK |
2 | 336 | 343 | ERRRRKKL |
Functional Description ? help
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Source |
Description |
UniProt | Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA (PubMed:18641265). Functions as a dimer with SPCH during stomatal initiation (PubMed:18641265, PubMed:28507175). {ECO:0000269|PubMed:18641265, ECO:0000269|PubMed:28507175}. |
Publications
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- Tarasov VA,Khadeeva NV,Mel'nik VA,Ezhova TA,Shestakov SV
The Atlg12860 gene of Arabidopsis thaliana determines cathelicidin-like antimicrobial activity. Dokl. Biol. Sci., 2009. [PMID:19760875] - Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Emmerstorfer A, et al.
Over-expression of ICE2 stabilizes cytochrome P450 reductase in Saccharomyces cerevisiae and Pichia pastoris. Biotechnol J, 2015. 10(4): p. 623-35 [PMID:25641738] - Lee HG,Seo PJ
The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis. Plant J., 2015. 82(6): p. 962-77 [PMID:25912720] - Raissig MT,Abrash E,Bettadapur A,Vogel JP,Bergmann DC
Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(29): p. 8326-31 [PMID:27382177] - Fu ZW,Wang YL,Lu YT,Yuan TT
Nitric oxide is involved in stomatal development by modulating the expression of stomatal regulator genes in Arabidopsis. Plant Sci., 2016. 252: p. 282-289 [PMID:27717464] - de Marcos A, et al.
A Mutation in the bHLH Domain of the SPCH Transcription Factor Uncovers a BR-Dependent Mechanism for Stomatal Development. Plant Physiol., 2017. 174(2): p. 823-842 [PMID:28507175]
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