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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.E01532.1.p |
| Common Name | LOC105967069, MIMGU_mgv1a024688mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
GATA |
| Protein Properties |
Length: 375aa MW: 40935.1 Da PI: 6.911 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.E01532.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 58.5 | 9.1e-19 | 255 | 289 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C t kTp+WR gp g+ktLCnaCG++y++ +l
Migut.E01532.1.p 255 CVHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 289
*******************************9885 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MDTAPEFYGQ TGCYYGGGGA ATFTTEKRLS DAKNGDHFVI EDLLNFPTDE GMLSSDEGGV 60
LDEAAAAAAI TSSAVVDTSC NSSFSAVNAD QPHFQYQSAD FAGSRGGHFS GELCVPYDDL 120
AELEWLSNFV EESFSSDDLQ KLHIIQGMKT RPDQLPVPDT HHQYHFQPES SQTGRILRPE 180
LSAPAKAARS KRSRAAAPGN WTSRLLAAPQ ANAAVPAASS SSESDVAAAR SAVYSKKKEG 240
PENSSSAGGG EGRRCVHCAT DKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT 300
FVLTKHSNSH RKVVELRRQK EQMRAQQQQQ QQQQFLHHHH HHHHHHQSMM FDVSNGGDDY 360
LIHQHIGPDF RQLI*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |
