PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01471.1.p
Common NameMIMGU_mgv1a022163mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 945aa    MW: 103838 Da    PI: 5.7939
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01471.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR43.94.6e-14523561341
               TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                       +k+CnCk+ kClk+YC+Cfaag +C+++C C++C+N+ e
  Migut.E01471.1.p 523 CKNCNCKRNKCLKLYCDCFAAGIYCADSCACQECFNRPE 561
                       79**********************************876 PP
2TCR48.81.4e-15610648139
               TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                       ++k+gCnCkks ClkkYC C++a++ Cs+ C+Ce+CkN 
  Migut.E01471.1.p 610 RHKRGCNCKKSMCLKKYCVCYQANVGCSDGCRCEGCKNV 648
                       589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-12521562IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163433.983522650IPR005172CRC domain
PfamPF036381.5E-10524559IPR005172CRC domain
SMARTSM011141.6E-16610651IPR033467Tesmin/TSO1-like CXC domain
PfamPF036384.5E-11612647IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 945 aa     Download sequence    Send to blast
MDSPESSKPT PIAAETAAIA QDSPVFSFIS NLSPIQPVKA PSVRQDFVEV NSPPLVFKSP  60
RLNPRSQLMS LKRSQFPRQI LSELPGQDEH GMNSVPTTKL DEKPDIQLCT NEEEGSDRNR  120
PVNDLERSAI GSSEQFLRDT MIMDSVGSEF SLDSTMRKSE CIDQPLNAVV KLDSELNSRI  180
SEEVGLAPPF ISRQGEEVRK ENIPVDARGT EIDKTQGDGD YVDQCPQIGH ELPVDNALTS  240
RDKENYVTEF QNVEAGQVAL LDPSSYLLSG PTEIGKRNES FVEANGAALT EPFLKKVQND  300
PEVFQHGGTR RRCLQFQDSQ YKAILNQSAE IPSNCDGIKS LSLETPSMPI NGKHDEVTQL  360
VRYPKNYSNS TINIPKPSGI GLHLNSIVNT VQPGSGAIVN VKSAHGNLSV TRKKSTLTIN  420
PRLSEYSNSS SVLSVVENAL ENTDDNTHEI QDSAVAMTAM PLSNHIVQPS NNTVVLNSVG  480
DQSTPGNKRN YTETDDGSDD FNYKSSPKNK RMKSSDPGNA GGCKNCNCKR NKCLKLYCDC  540
FAAGIYCADS CACQECFNRP EYEDTVLETR QKIESRNPLA FAPKIVQQAI EQPATIHAED  600
GTNFTPSSAR HKRGCNCKKS MCLKKYCVCY QANVGCSDGC RCEGCKNVFG QKGEYGMIKD  660
VWNEKDTNVT TNGSFLEKCE IEPSGNGVHR DELYNLHNLS PITPAFDFSN HGKDASKAWC  720
HSGKYFESPE PGYTFVAPYM MSSESSRSSD NHVLNSETGE GILDRVSFEQ SHHGNSEMVD  780
ELLSAEFHHP GTMGRLSSTP NLKNWADNSK SQPFPAQRHS SGSSLVWGGS PQTPMAQFSG  840
TKMHRELQFD SGLSSIAEDD RPEILKDNST PNDAVKVSSP NKKRVSPPHR RQNEFDSSSL  900
AGLTSGRKFI LQAIPSFPPL TPCVDSETVT TQHKIDPQNR NVHK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A5e-1652464812121Protein lin-54 homolog
5fd3_B5e-1652464812121Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01471.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847197.10.0PREDICTED: CRC domain-containing protein TSO1-like
TrEMBLA0A022QRT30.0A0A022QRT3_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01471.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA69802128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.11e-47Tesmin/TSO1-like CXC domain-containing protein