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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.E01434.1.p |
Common Name | LOC105967211, MIMGU_mgv1a009654mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
CO-like |
Protein Properties |
Length: 336aa MW: 36588.9 Da PI: 5.0264 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.E01434.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 24.3 | 6.3e-08 | 11 | 47 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg...H 37
+ C++++ ++ fC+ ++ +lC+ C H H
Migut.E01434.1.p 11 KPCDTCKAAAATVFCRADSAFLCAACDADAHAAdsrH 47
67******99******************999555556 PP
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2 | zf-B_box | 27.8 | 5.2e-09 | 50 | 95 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
++C+ +e+ ++ C+ + lC++C +H+ H+++p+
Migut.E01434.1.p 50 VWVCEVCEQAPAAVTCKADAAALCPTCDRDIHSAnplalrHERIPI 95
689*****************************66999999999886 PP
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3 | CCT | 71.4 | 2.2e-24 | 280 | 323 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RYkeKrk+RkFeK+irY+sRKa+Ae+RpRvKGrF+k++
Migut.E01434.1.p 280 REARVMRYKEKRKNRKFEKTIRYASRKAYAETRPRVKGRFAKRE 323
9*****************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MGGQSWSLTA KPCDTCKAAA ATVFCRADSA FLCAACDADA HAADSRHARV WVCEVCEQAP 60 AAVTCKADAA ALCPTCDRDI HSANPLALRH ERIPIVPFYD AADVSVKKSS TRAAAAAGEC 120 SDEEAEAASW LLPDPNSKPD DESGLPEYKS AGYLFNEMDP YLDLDLGSGQ QKLMISRAMV 180 NDDDQQKQYC SDGVVPVQKE NEYGSGRYPG PAVDGFPTYD LDYPAAAAKP FMYNFTSQSI 240 TQTVSCSSMD VGVVPDDSTT VDISNTQKEE LPVRLSGVDR EARVMRYKEK RKNRKFEKTI 300 RYASRKAYAE TRPRVKGRFA KRETDASSYG VVPTY*
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