 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Migut.E01420.1.p |
| Common Name | LOC105967267, LOC105967268, MIMGU_mgv1a010821mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
Trihelix |
| Protein Properties |
Length: 301aa MW: 33755.7 Da PI: 4.5415 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.E01420.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 31.6 | 4.3e-10 | 19 | 87 | 2 | 70 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
Wt +e l L++ +e++ +++ ++W+++ +++ + ++r+ +qCk kw++l +y+++k+ +
Migut.E01420.1.p 19 WTAEESLILVNEIYAVESEWGATLPSFQKWQQIVENCNALEVSRNLNQCKRKWDELLIEYRRVKHDAAA 87
****************************************************************98775 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MDEPRGSRRC TRSRAAPDWT AEESLILVNE IYAVESEWGA TLPSFQKWQQ IVENCNALEV 60
SRNLNQCKRK WDELLIEYRR VKHDAAADGS LPVELFDAID MCVGARGRKY GGAEAAAVAA 120
EKAVAEEEEQ VVMATDPDSD PEAQGRATEF FLETGTKKQR PRMKRKKRRL ETLNPWGYST 180
SAKSIKQEEE EENSNINEKR GNTNNVTQST PEPEQSSVET REQIMATMLW DNAMKINAIL 240
EGNVADDTDY KLADMKNAEA VETDFTRLQG DKLIDCFGKI SETLKQLCEI VQQNATAALP 300
*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 156 | 169 | KKQRPRMKRKKRRL |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G31270.1 | 3e-32 | sequence-specific DNA binding transcription factors |
