PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.E01408.1.p

Common Name

LOC105967267, LOC105967268, MIMGU_mgv1a010821mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 301aa MW: 33755.7 Da PI: 4.5415

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.E01408.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.6	4.3e-10	19	87	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt +e l L++ +e++ +++ ++W+++ +++ + ++r+ +qCk kw++l +y+++k+ + Migut.E01408.1.p 19 WTAEESLILVNEIYAVESEWGATLPSFQKWQQIVENCNALEVSRNLNQCKRKWDELLIEYRRVKHDAAA 87 ****************************************************************98775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	8.3E-10	18	100	No hit	No description
PROSITE profile	PS50090	7.178	19	75	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009506	Cellular Component	plasmodesma

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
MDEPRGSRRC TRSRAAPDWT AEESLILVNE IYAVESEWGA TLPSFQKWQQ IVENCNALEV 60 SRNLNQCKRK WDELLIEYRR VKHDAAADGS LPVELFDAID MCVGARGRKY GGAEAAAVAA 120 EKAVAEEEEQ VVMATDPDSD PEAQGRATEF FLETGTKKQR PRMKRKKRRL ETLNPWGYST 180 SAKSIKQEEE EENSNINEKR GNTNNVTQST PEPEQSSVET REQIMATMLW DNAMKINAIL 240 EGNVADDTDY KLADMKNAEA VETDFTRLQG DKLIDCFGKI SETLKQLCEI VQQNATAALP 300 *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	169	KKQRPRMKRKKRRL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.E01408.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012847324.1	0.0	PREDICTED: uncharacterized protein LOC105967267
Refseq	XP_012847325.1	0.0	PREDICTED: uncharacterized protein LOC105967268
TrEMBL	A0A022QKB5	0.0	A0A022QKB5_ERYGU; Uncharacterized protein
STRING	Migut.E01408.1.p	0.0	(Erythranthe guttata)
STRING	Migut.E01420.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8360	21	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-32	sequence-specific DNA binding transcription factors

Link Out ? help Back to Top
Phytozome	Migut.E01408.1.p
Entrez Gene	105967267 \| 105967268