PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01297.1.p
Common NameMIMGU_mgv1a021100mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 232aa    MW: 25302.3 Da    PI: 4.9778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01297.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.5e-1661108355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+G+r  +++g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++ a+++l+g
  Migut.E01297.1.p  61 YRGIR--SRTGKWVSEIREPRK---TTRIWLGTYPSPEMAAAAYDVAALALKG 108
                       99995..789*********843...5***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.5E-2560117IPR001471AP2/ERF domain
SMARTSM003804.4E-2460122IPR001471AP2/ERF domain
PROSITE profilePS5103219.91560116IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-1760118IPR016177DNA-binding domain
PfamPF008473.8E-961108IPR001471AP2/ERF domain
CDDcd000183.68E-1461118No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MSDSPHDQQP NNMIQQRHRP PSPYSPNSPT HSQSSPPKKI KKTTTSSAAA AAATNGKHPM  60
YRGIRSRTGK WVSEIREPRK TTRIWLGTYP SPEMAAAAYD VAALALKGGD VLLNFPDHVT  120
SFPVPSSPSP QDIRRAAADA AEMMRPAGGD TAADDRKLPR EDTEAAAAAE PPDNIVETII  180
DEFIDEEALF YMPNLLLDMA EGMLVSLPRM AFRPPEDSPE NSEGESLWSY F*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01297.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846373.11e-169PREDICTED: ethylene-responsive transcription factor ERF027
SwissprotQ9FJ902e-51ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A022QRD91e-168A0A022QRD9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-41ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]