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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.E01090.2.p |
Common Name | LOC105956914, MIMGU_mgv1a002904mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 628aa MW: 70004.2 Da PI: 6.0368 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.E01090.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42 | 1.6e-13 | 425 | 472 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+h Er+RR++iN++f L +l+P+ +K +K++iL +++eY++ L+
Migut.E01090.2.p 425 RNHVLSERKRREKINERFMILGSLVPSG-----GKADKVSILDHTIEYLRGLE 472
579999********************98.....8***************9985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 628 aa
Download sequence Send
to blast |
MAGGDQDQKR VLEKLRKQLA LAVRSIQWSY GIFWSISAKK HGALEWGDGY YNGDIKTRKT 60 VQTVEVDTDQ LGLQRSDQLR ELYESLSLGE VIPQPKRPTA ALSPEDLTDA EWYFLVCMSF 120 VFNVGQGLPG KTLAKNGTVW LRNAHRADTK VFSRSLLAKS ASIKTIVCFP HLDGVVELGT 180 TELVPEDRNL VQHVKTSFLE GLSEDFPDVP TNSTDLDCEV LDHAITDCGD VEVSSPESSS 240 GDFADNLLRE ESNNLIDDID KEASQMMSWQ FKDEANSNNG PNNSTSSSDC VSQTRENHAT 300 AVPFSDVKIH ENQECNNSNN NNNNNNNNNN NVHYESVLSS LLKSSSQLML GPHVRNGNKE 360 SSFTGWDIIS CCKTHTTTVG APQSLLKKVL FEVGKMHESY RIENGKKDEK NEEEISKPEV 420 DEVDRNHVLS ERKRREKINE RFMILGSLVP SGGKADKVSI LDHTIEYLRG LERKVEELES 480 NKESTEVEST TQSKSHDAIE RTSDNYGPTK TDNSNKRPLT NSKRKACDLD KTGPANRRVR 540 LKDSSTDSVT IKISDKDVLI ELRCIWRESV LSEVMEAVNK LNLHSQTVQS SNSDGIFSMS 600 IKAKCKGVKS ASPSVMRQAL QKVIRKC*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 5e-17 | 13 | 198 | 7 | 192 | Transcription factor MYC3 |
4rqw_B | 5e-17 | 13 | 198 | 7 | 192 | Transcription factor MYC3 |
4rs9_A | 5e-17 | 13 | 198 | 7 | 192 | Transcription factor MYC3 |
4yz6_A | 5e-17 | 13 | 198 | 7 | 192 | Transcription factor MYC3 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 430 | 435 | ERKRRE |
2 | 431 | 436 | RKRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ011142 | 1e-107 | KJ011142.1 Erythranthe lewisii basic helix-loop-helix transcription factor (ANbHLH1) gene, complete cds. |