PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00340.1.p
Common NameLOC105966210, MIMGU_mgv1a007591mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 403aa    MW: 45617.7 Da    PI: 5.5318
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00340.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box30.86e-101660341
          zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                      +r C+ + +k+++++C  ++ +lC++C ++ H+       H++v 
  Migut.E00340.1.p 16 ARACDSCIKKRARWYCAADDAFLCQSCDSSVHSAnslarrHERVL 60
                      678*****************************6578888888775 PP
2CCT65.61.4e-22347390144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       Rea+++RY+eKr++R+F+KkirYe+RK +Ae+RpR+KGrFvk+a
  Migut.E00340.1.p 347 REARVSRYREKRRKRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 390
                       9*****************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.9211461IPR000315B-box-type zinc finger
SMARTSM003361.3E-121461IPR000315B-box-type zinc finger
PfamPF006435.9E-81660IPR000315B-box-type zinc finger
CDDcd000213.04E-101761No hitNo description
PfamPF062032.5E-17347389IPR010402CCT domain
PROSITE profilePS5101716.013347389IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MDSDRKLSDT IVGKSARACD SCIKKRARWY CAADDAFLCQ SCDSSVHSAN SLARRHERVL  60
LKSASIHKIK SEPSNWHQGF TRKARTPRHK KNGKAAAALF SNTNHPLPLV PEINNSSEEK  120
SNEEENEEQL LYRVPIFEPV SDFITHEANT SERNILAPPS SSGMDLDEFA ECLLGKGMDD  180
FHESFNNMEG LGFLDDCDDE NGGRGLSSNE LFWLSDESVK VEENHHQIEV EFDMGRETFE  240
LNFDFDYSPT RGEEQEQEEE EIAAFNNFEN FAMENYEKTL LKLDYGGVMS AWDKHKSPWT  300
TGERPPEPIS GCHWPEFSGA CGTMGVNGET GKINENIPAA ATGDGGREAR VSRYREKRRK  360
RLFSKKIRYE VRKLNAEKRP RMKGRFVKRA NLEAPAFSLL NT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1358373RKRLFSKKIRYEVRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00340.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846230.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 16-like
TrEMBLA0A022QRT90.0A0A022QRT9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15392470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.16e-66B-box type zinc finger protein with CCT domain