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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.E00117.1.p |
| Common Name | LOC105974817, MIMGU_mgv1a012337mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 254aa MW: 29282.7 Da PI: 4.6271 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.E00117.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.3 | 5.6e-18 | 50 | 103 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++++q++ Le+ F ++++ +++ +LAk++gL+ rqV +WFqNrRa++k
Migut.E00117.1.p 50 KKRRLKPDQVRFLEKSFDLENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARYK 103
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 117.3 | 8.4e-38 | 49 | 140 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ +qv++LE+sF+ e+kLep+rK +la+e+glqprqva+WFqnrRAR+ktk lEk++++Lk++yd+lk+e +++ +++++L++e++
Migut.E00117.1.p 49 EKKRRLKPDQVRFLEKSFDLENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARYKTKILEKEHSSLKANYDKLKQEYDAVFAQNQKLKDEVN 140
69**************************************************************************************9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MEGSIWASNS SPSFHGSASM VNFEEFRDNN KNKNNNSNEE LDGSFHQSEK KRRLKPDQVR 60
FLEKSFDLEN KLEPDRKIQL AKEVGLQPRQ VAIWFQNRRA RYKTKILEKE HSSLKANYDK 120
LKQEYDAVFA QNQKLKDEVN LLREKVVVKE ECDNFEEKTP FLCGDIEAAA ATSDVFDSDN 180
YSSDVFETDN LSVSEFSQKD ESLRMAGLLL LQPATSCLPK LEMVEEFFDD LQPNSCNLGF 240
PIQDQLGTWL WQF*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
