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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.E00076.1.p |
Common Name | LOC105974786, MIMGU_mgv1a023545mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MYB |
Protein Properties |
Length: 370aa MW: 40768 Da PI: 7.5242 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.E00076.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 58.4 | 1.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+l+ +++++G g+W++ +++ g++R++k+c++rw +yl
Migut.E00076.1.p 14 KGPWTPEEDEKLLAYIHEHGHGSWRALPSKAGLRRCGKSCRLRWANYL 61
79********************************************97 PP
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2 | Myb_DNA-binding | 53.9 | 4.3e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ +E+e +++++++lG++ W++Ia +++ +Rt++++k++w+++l
Migut.E00076.1.p 67 RGKFSLQEEETIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MGRTACCEKM GLKKGPWTPE EDEKLLAYIH EHGHGSWRAL PSKAGLRRCG KSCRLRWANY 60 LRPDIKRGKF SLQEEETIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKKLTKMG 120 IDPITHKPKN LVAVDCGQSK EIANISHMAQ WESARLEAEA RLVLRGAPNP FHSDLSFVNK 180 ASAAAPPLPP RPRPPCLDIL KVWAWTNPDK DISTMILNGY SPSSWSIINQ PTQNTPTSNF 240 SENTVQIQDV GLFNGDSSIN AIPNVKGIMG NSMELHYTTT TMNPTSDDYT TSSYTNGDSF 300 LGFPSFVEGF VDVPSSAVQN GYSDGNDNNS NNVVVGGGWG VLDESNVNCW NNVLDFPTCS 360 PPMGSSVLL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ202274 | 0.0 | HQ202274.1 Mimulus guttatus isolate A pop-variant IM62 MYB transcription factor MIXTA-like 5 protein (MYBML5) mRNA, partial cds. |