PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02248.1.p
Common NameMIMGU_mgv1a002578mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 670aa    MW: 74684.3 Da    PI: 6.8751
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02248.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82e-094845162254
                       SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       ++yp+ +++  LA+++gLt +qV++WF N R +
  Migut.D02248.1.p 484 HPYPTDTDKHMLATQTGLTRNQVSNWFINARVR 516
                       89*****************************87 PP
2BELL105.73.1e-34338404672
              BELL   6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                        +kkakL+ +++eV+k+Ykqy++q+q+v+ssFe vagl +a+pY+slAlk++S+hFrcLk+ai++q+
  Migut.D02248.1.p 338 LQKKAKLMYMQDEVCKKYKQYHQQIQMVVSSFESVAGLSAATPYVSLALKTVSKHFRCLKNAITDQL 404
                       579*************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.4E-39261402IPR006563POX domain
PfamPF075262.7E-37266401IPR006563POX domain
PROSITE profilePS5007111.774457520IPR001356Homeobox domain
CDDcd000865.65E-11460521No hitNo description
SMARTSM003895.2E-8460524IPR001356Homeobox domain
SuperFamilySSF466897.27E-17462526IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-28463524IPR009057Homeodomain-like
PfamPF059206.8E-18477516IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    Send to blast
MDMSNFRPEL HVAQQSRRDK LRIQHESNGP HHNIEVYINN LEQQQHHGLN NYESAIPRTF  60
RPGSICYNPS EICPEVLNFP PENQEPDKRA PFENFYREIP TADVSNDPQY FNTWKTVGSQ  120
STTTDNNWVP NDNNNTQSPI FVGARMSTLD NVKPYLGYQD NHNMHCTSSS LYQNALQELV  180
TSSNVRPFGF ESASFRQMGP QDTRALSLSL SSVPSPRVHA TQIADHIQET VTWKPEFSTA  240
GGSNLASAST HRNPGPLGPF TGYSTILGNS KFLRSAEQLL DEHCCGSRHK NVDVCEVSNK  300
ISEVVRVSVG DLENDLDGVG GSSFAFNGSN DSYQPESLQK KAKLMYMQDE VCKKYKQYHQ  360
QIQMVVSSFE SVAGLSAATP YVSLALKTVS KHFRCLKNAI TDQLKSMRNA LGEELMSPSV  420
DTRSIKGDAG GSMLKFFDHG FNKQKGTAGG LGILESQHIW RPQRGLPERS VSILRAWLFD  480
HFLHPYPTDT DKHMLATQTG LTRNQVSNWF INARVRVWKP MVEEIHMLET KGVSETGSGV  540
LLNAPKTTNH NEGFDQSNES SNQPLNRLKM SSIIDKQMVE YSSAEQEDAV GSNVNVWNQE  600
KRSRVEYHVP SGPTPDGSMM EYSLMMPPHR SGPEMGGLGS VSLTLGLRQS AESGQRSRFG  660
GQIIRDYVG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-15466524563Homeobox protein Meis2
3k2a_B1e-15466524563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02248.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827886.10.0PREDICTED: BEL1-like homeodomain protein 8
TrEMBLA0A022PR430.0A0A022PR43_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87202227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.11e-82BEL1-like homeodomain 8